KEGG   Plasmodium cynomolgi: PCYB_042470
Entry
PCYB_042470       CDS       T02490                                 
Name
(RefSeq) DNA-directed RNA polymerase II 16 kDa subunit
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pcy  Plasmodium cynomolgi
Pathway
pcy03020  RNA polymerase
pcy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PCYB_042470
  09124 Replication and repair
   03420 Nucleotide excision repair
    PCYB_042470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcy03021]
    PCYB_042470
   03400 DNA repair and recombination proteins [BR:pcy03400]
    PCYB_042470
Transcription machinery [BR:pcy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     PCYB_042470
DNA repair and recombination proteins [BR:pcy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PCYB_042470
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 14695881
NCBI-ProteinID: XP_004225444
UniProt: K6UIJ6
LinkDB
Position
4:639925..640736
AA seq 132 aa
MAGNEHGDVKNLDLGPEFKNCKCLNLCELQLILGDQLRLTSKRNEEAQTLIKSSFDYANK
FATIKNRSSIVDVRTNLERIGELHEYEIAMLVNLLPKTVQEARYFIPSLIRLSDETLNSI
LEHLISYKMYVS
NT seq 399 nt   +upstreamnt  +downstreamnt
atggcgggtaacgagcatggggatgtaaaaaatttggacctgggaccagaattcaaaaac
tgcaagtgcctaaacttgtgcgagttgcaactcatcttgggagaccagctgcggctgacg
tcgaagcggaacgaggaggctcaaacgctgataaaatcctcgtttgactacgccaacaaa
ttcgctacgataaaaaacaggagctccatcgtggacgtgcgtaccaacttggagcgcata
ggggagctacacgagtacgagatagctatgctggtgaacctgctgccgaagacagtacag
gaggcgaggtacttcatcccgtccctcattcgactcagcgacgagacgttgaattcgatt
ttggagcacctcatcagttataagatgtacgtctcgtga

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