Plasmodium cynomolgi: PCYB_051990
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Entry
PCYB_051990 CDS
T02490
Name
(RefSeq) ATP-dependent RNA helicase prh1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCYB_051990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcy03019
]
PCYB_051990
03012 Translation factors [BR:
pcy03012
]
PCYB_051990
Enzymes [BR:
pcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PCYB_051990
Messenger RNA biogenesis [BR:
pcy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
PCYB_051990
Translation factors [BR:
pcy03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
PCYB_051990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
Helicase_C
DEAD
ResIII
nSTAND3
HA2_N
AAA_22
AAA_14
AAA_11
NPHP3_N
Flavi_DEAD
TsaE
Sigma54_activat
T2SSE
Motif
Other DBs
NCBI-GeneID:
14691570
NCBI-ProteinID:
XP_004221128
UniProt:
K6UCN9
LinkDB
All DBs
Position
5:437828..440721
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AA seq
758 aa
AA seq
DB search
MSDLPILKHKKEIKKCIKKNRLIIIKGETGCGKTTQVPQIINRYFFDKRRRGGSGGGEDD
KRGGGDKQGGGDAVCKDDAACKDGAACKGGRSAGSRKKKGPMRMLISLPRRVATITVAER
VAKEMNRGRIGTYVGYAIRFKNVTSDETKIKFVTDGILIREIMNDPFLKKYTFLILDEVH
ERSIRTDVLLGYVRILMQKRKKLRVILMSATLDVATFKNFFSNPPIISIPHKLHPVTIFY
PIKPVEDYLISVVCTVLQIHFGQGERQGEWQEERQGERQGEWQGEPLTELPTKATTEAPT
PIGDVLVFLPGQEEIEAVNLMLKEKLKIIYKGSLLRKLIKDDQGDEEEGEVLDKINVALH
AKNPIEDGVCFHFGHREVVPDKIYAMKILQLYSSLPNRKQRVVFEPAPPNTRKVILSTNI
AETSVTIPNIKYVVDSGRAKIKFFDAKKGSSVLKVTQISKDAATQRSGRAGREAPGQVYR
VYSKEEYESMNPFLIPEIFRSDLTQIYLELKAMNIHNPLQFNFPENPKKELLLHSAKVLF
RINAIDVDNNLTDHGKKMCLLPLNPIYANMMLCSVEFHCIDEVATIVAFLNCESIFLNYN
FYEDLKILNEDSVGGSVTCSARGEGSKDDAAVAAKAGGSAKVDGSAKVDNTSDTDGSSNA
ANYGNAANHANPANAANHGNHGSEEDPPMSDRNKLINIARRKLIHPDGDHLTLLHIFYLW
EEEATPNERKHFCNLYALNNEALQQVQKIKEQILQIMT
NT seq
2275 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctgcccatattgaagcacaagaaggaaattaaaaaatgcatcaagaaaaat
aggctaataatcattaagggggagacggggtgcgggaagacaacccaggtgcctcaaata
ataaacaggtacttttttgataagaggcggaggggggggagtggcggcggtgaggatgat
aagcgggggggtggtgacaagcaggggggtggtgacgcagtttgcaaggatgacgcagct
tgcaaggatggcgcagcttgcaagggtggccgctccgctgggtcgcgaaagaagaaaggc
cccatgcgcatgctgatctcgctgcccaggagagtagcaaccatcacggtagcggagaga
gtggcgaaagaaatgaacagaggacggataggaacttacgtcggatatgcaatcagattt
aaaaacgtaacctctgatgaaactaaaatcaaatttgtaactgatggaattctcatcagg
gaaattatgaatgatccatttttaaaaaaatatacctttttaatcctagatgaagtacac
gaaaggtccattagaacggatgtgctgttgggttacgttaggatattaatgcaaaagagg
aagaagctgagagttatcctcatgtctgcaaccttggacgtggctacttttaaaaacttc
tttagcaaccctccgattatttccattccgcataagttacacccagttaccattttctat
cccatcaagcctgtcgaggattacctcatttcggttgtctgcaccgttctgcaaatacat
ttcgggcagggggagcggcagggagagtggcaggaagagcggcagggggagcgacagggg
gagtggcagggggagcccctaacggagctgccgaccaaagcgacgaccgaggcacccaca
cccatcggagacgtcctggtcttcttacccggtcaggaagaaatcgaagcagtaaactta
atgctgaaggaaaaactgaaaattatttacaaaggctccctgctgcgaaagctgattaag
gacgatcagggggacgaggaagaaggggaggtactggacaaaataaacgttgccctgcat
gcgaagaatccaatcgaggatggagtttgtttccacttcggccacagggaggtggtaccg
gacaagatatacgcaatgaagattctgcagctctactcgtctctccctaataggaagcag
cgggtcgtcttcgagcccgcgccacccaacacgcgaaaggtcatcctcagcacgaatatc
gccgagacgtcagttaccatcccaaacataaagtacgtggtggacagtgggcgcgcgaag
ataaaattcttcgatgcgaagaaggggagcagcgttttgaaagtcacgcaaatatcgaag
gatgccgccactcagaggagtgggagagctgggcgagaggcacccggacaggtctacagg
gtgtattccaaggaggagtacgagagcatgaatccgtttttaattcctgagattttccgc
tctgatcttacgcaaatatatttggagttgaaggccatgaacatccacaacccgctacag
tttaacttcccggagaatcccaagaaggagctactccttcactccgccaaggtactcttc
cgaatcaacgcaatcgatgtagacaataacctaaccgaccatgggaaaaagatgtgtctc
ctaccactgaacccgatctatgcaaatatgatgctgtgttctgtggagttccattgcata
gatgaagtagctacgatcgtggcgttcctaaactgtgagagcatatttttgaattacaat
ttttatgaggacttgaaaattctgaatgaagactcggtgggaggctctgtcacgtgttcg
gcccgaggagagggcagcaaggacgacgccgcggttgctgctaaggcgggtggcagcgct
aaggtggatggcagcgctaaggtggataacacttccgacacggatggcagttctaacgcc
gctaactacggtaacgccgctaaccacgctaaccccgctaacgccgccaaccacggtaac
cacggcagcgaggaggacccgccaatgagcgacaggaacaaactcattaacatcgcgcgg
aggaagctgatacacccggatggagaccacctaaccctcctgcacatattctacctgtgg
gaagaagaggccacccccaacgagcgaaagcatttttgcaatttatatgccctgaataac
gaagccttacagcaagtacagaaaataaaagaacaaatactacaaataatgacca
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