KEGG   Plasmodium cynomolgi: PCYB_053610
Entry
PCYB_053610       CDS       T02490                                 
Name
(RefSeq) eukaryotic initiation factor
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
pcy  Plasmodium cynomolgi
Pathway
pcy03013  Nucleocytoplasmic transport
pcy03015  mRNA surveillance pathway
pcy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PCYB_053610
  09122 Translation
   03013 Nucleocytoplasmic transport
    PCYB_053610
   03015 mRNA surveillance pathway
    PCYB_053610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcy03019]
    PCYB_053610
   03041 Spliceosome [BR:pcy03041]
    PCYB_053610
   03009 Ribosome biogenesis [BR:pcy03009]
    PCYB_053610
   03012 Translation factors [BR:pcy03012]
    PCYB_053610
Enzymes [BR:pcy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     PCYB_053610
Messenger RNA biogenesis [BR:pcy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     PCYB_053610
   mRNA cycle factors
    Stress granule specific factors
     PCYB_053610
Spliceosome [BR:pcy03041]
 Complex C
  Other components
   EJC/TREX
    PCYB_053610
Ribosome biogenesis [BR:pcy03009]
 Eukaryotic type
  90S particles
   Helicases
    PCYB_053610
Translation factors [BR:pcy03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    PCYB_053610
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_30 Helicase_RecD AAA_7 CMS1 BATS
Other DBs
NCBI-GeneID: 14691443
NCBI-ProteinID: XP_004221290
UniProt: K6UIU4
LinkDB
Position
5:1173501..1174673
AA seq 377 aa
MEKEENYKTSEKYEICTSFENIGIDEGLLRGIYAYGFEKPSAIQQRGIKPILSGRDVILQ
SQSGTGKTCVFAVGALNCVNRNLSETQVIILSPTRELAEQTQKVCLALADYIHVTVYCCI
GGKKMSDDIKALNNGVHIISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQI
VLSSATLPQEVLEITNKFMHRPVKILVKRDELTLEGIKQFFVSIEKEQWKYETLADLYES
LTITQAVVFCNTKMKVDWLTKKMQEANFTVCKMHAGMSQSERDDIMLKFRQCKFRVLIST
DIWGRGLDVQEVSLVVNYDLPNSRESYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQ
YYSTQIDEMPMNITELL
NT seq 1134 nt   +upstreamnt  +downstreamnt
atggagaaggaggagaattacaaaacgtcggagaagtacgaaatatgtacgagtttcgaa
aacatcggaattgacgaagggttgctgagggggatctacgcgtacggatttgagaagccg
tcagctatccagcaaaggggtatcaaaccaatattaagtggcagagatgtcatcctgcag
agccaaagtgggacaggaaaaacgtgcgtgtttgcagtaggtgctctaaattgcgtaaac
cgcaatttgagcgaaacgcaggtgattatcttatctccgacgagagagctagcagagcag
acgcaaaaggtgtgtctagcgctagctgattatatacacgtaactgtatactgttgtata
ggaggaaaaaaaatgagtgatgatataaaggcattgaacaacggagtacatatcattagt
ggaactcccggaagaatatatcatatgctaaacttgagacacttaaagtgtaagtatata
aaacagttagtcattgacgaagcagatgaaatgctcaacaagggattcaaagaacagatc
gtactctcttcagctacactaccacaagaggtgttagaaataacgaataaattcatgcac
agaccggtgaagatattagtaaaaagggatgaactaactttggaaggaattaagcaattt
tttgtgtccatagagaaggagcaatggaaatatgaaacgcttgctgacttgtacgagagc
ttaactatcacccaagctgttgttttttgtaatacgaagatgaaggttgattggttgacg
aagaaaatgcaagaggcgaactttaccgtttgtaaaatgcatgctggaatgagtcagagt
gagcgagatgatattatgttaaaatttcggcagtgtaaattccgtgtacttatatcgact
gacatttggggtaggggactggatgtgcaggaagtgtctcttgttgttaactatgactta
cccaactctagggagagctacattcaccgcatcgggaggagtggtcgatttggcaggaag
ggtgttgcaatcaactttgtcaaaaatgatgacataaaaattcttagggatatcgagcag
tactactccacgcagattgacgagatgccaatgaacatcacggagctgctctag

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