Plasmodium cynomolgi: PCYB_061130
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Entry
PCYB_061130 CDS
T02490
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03030
DNA replication
pcy03410
Base excision repair
pcy03420
Nucleotide excision repair
pcy03430
Mismatch repair
pcy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCYB_061130
03410 Base excision repair
PCYB_061130
03420 Nucleotide excision repair
PCYB_061130
03430 Mismatch repair
PCYB_061130
03440 Homologous recombination
PCYB_061130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcy03032
]
PCYB_061130
03400 DNA repair and recombination proteins [BR:
pcy03400
]
PCYB_061130
Enzymes [BR:
pcy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PCYB_061130
DNA replication proteins [BR:
pcy03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
PCYB_061130
DNA repair and recombination proteins [BR:
pcy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
PCYB_061130
MMR (mismatch excision repair)
DNA polymerase delta complex
PCYB_061130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
C6_DPF
E2-Crich
Motif
Other DBs
NCBI-GeneID:
14691852
NCBI-ProteinID:
XP_004221328
UniProt:
K6UCS9
LinkDB
All DBs
Position
6:64659..68445
Genome browser
AA seq
1159 aa
AA seq
DB search
MPTQCQRDASVVPTQCQLNETPRGAILLFRCPNSWLPCGRLGEKTNSAPRPDPQLAEERL
PVHGQGMKKCPFTSVIPYGMLYEKLKKEKNNQLPENVVIEEFNQLLSTYERPSPYDTNGT
IHVSNQKDLILFQIDIEYTVDSIFKSMVFTNDGTPNGSALTDIFSPYRTLFQNNEKNYVS
VPVIRIYTVTNDGYSVLVNVHNFFPYFYVEMPSHFDKEDLLKLECMMNDNLNANSQYKIY
DKKILNIEIVKTESLMYYKRDGKKDFLKITVLLPKMVPSLKKFFESVVNVNGKSIGGIVY
EANLPFILRYIIDKKITGSSWLLCKNNHFHIRPKHKKISNCSFEIDISYEHIEPMPLENE
YQQIPKIRIVSFDIECIKLDGKGFPEAKNDPIIQISSILYFQGDPIGKCSKFIFTLKECA
SIPGSNVIWFSDEKTLLDAWSEFITRLDPDFLTGYNIINFDLPYILNRGTALNLKKLKML
GRIKNISSVVKESSFSSKQFGTHETKEININGRIQFDVYDLIKRDYKLKSYTLNYVSFEF
LKEQKEDVHYSIMNDLQNESPESRKRIATYCIKDGILPLRLIDKLLFIYNYVEMARVTGT
PFVYLLTRGQQIKVTSQLYRKCKELNYVIPSTYIKSGSNEKYEGATVLEPIKGYYIEPIS
TLDFASLYPSIMIAHNLCYSTLVKNNSEIEGLKQEEVTSIQGKGNIKFVKRSVKKGILPL
IVEELIDARKKVKLLIKNEQNKITKMVLNGRQLALKISANSVYGYTGAASGGQLPCLEVA
VSITTLGRSMIDKTKETVEKYYSRSNGFEYNSTVVYGDTDSVMVKFGTNSIAEAMALGKD
AAQRISKEFLHPIKLEFEKVYCPYLLLNKKRYAGLLYTTPEKHDKMDCKGIETVRRDFCI
LIQQMMETVLNKLLIEKNLNSAIEYTKSKIKDLLTNNIDMSLLVVTKSLGKTDYETRLPH
VELAKKLKQRDSATAPNVGDRVSYIIVKGVKGQAQYERAEDPLYVLDNNLAIDYNHYLDA
IKNTLSRIFEVIMQNSDSLFCGEHTRHKTILTSSQTALSKFLQKAVRCIGCNSSIKKPPL
CNHCKMNKEFSIYMQKMNHFKTKQNEFFQLWTECQRCQGNLHAEVICMNRDCPIFYRRAK
IKKDMANVQEQISALRADW
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgcctacgcagtgccaacgtgatgcgagcgtagtgcctacacagtgccaactgaatgaa
acgccaaggggggcaatcctcctttttcgctgccctaattcgtggctgccctgcggacgc
ttgggagaaaagaccaattctgctccccgtccggacccgcagctggccgaggagcgccta
ccagtacacggacaaggcatgaagaagtgccccttcaccagcgtcatcccctacgggatg
ctgtacgagaagctgaaaaaggagaagaacaaccagctgcccgaaaatgtagttatcgag
gagtttaaccagctgctctcgacatacgaaaggccaagtccctatgacactaacggaacc
attcatgtatccaaccaaaaggatttaattctctttcagatagacatagaatacacagtg
gacagtattttcaagagcatggtcttcacaaatgatggcactcctaatggaagcgcccta
accgatatcttctctccttaccgaacgttgtttcaaaataatgagaagaactacgtgtcc
gtgccggtcatccgcatatacaccgtgacgaacgatgggtatagtgtccttgtaaacgta
cacaattttttcccctatttctatgtagaaatgccaagccacttcgacaaggaggacttg
ctaaagctcgaatgcatgatgaatgacaatctgaatgcgaatagccaatacaaaatatat
gacaaaaaaattctgaacatcgaaattgtgaagacggagagtctaatgtactacaagcga
gatggaaaaaaagacttcctaaaaatcaccgtcctccttcctaagatggttcctagtttg
aaaaagtttttcgagtctgtcgttaatgtaaatggaaaaagcataggtgggatcgtctac
gaagctaacttacctttcattctacgttacataatagacaaaaaaatcacgggttcttct
tggcttctctgcaagaataaccattttcacattcgaccgaaacataaaaaaatatccaat
tgctccttcgaaattgatatatcgtatgaacatatagaacccatgccactagagaatgag
tatcagcaaatcccaaaaataagaattgtatccttcgatatagagtgtattaagttggat
ggaaaaggattccctgaagcaaaaaatgatcccataatacaaatatcgtccattctctac
tttcaaggagatccaattggaaaatgctcaaaatttatcttcactctaaaggagtgtgct
agtatccctggttccaatgtaatttggttttccgatgaaaagacgttactagatgcatgg
agtgaattcatcacaagacttgacccagatttcctaactggttacaatataataaatttt
gatttaccttacatcctaaatagaggtactgctctcaatttgaagaagttaaaaatgttg
ggaagaataaaaaatatcagcagtgtggttaaggagtcgagtttttcttccaagcaattt
gggacccatgagaccaaagaaattaacataaatgggagaatccaattcgacgtctatgat
cttataaagagagactacaagctaaaatcgtacactcttaattacgtctcgttcgaattc
ttgaaggagcagaaggaagacgttcactacagcatcatgaatgatttacaaaatgaaagt
cctgagtctaggaagagaatcgctacgtattgtataaaagacgggattcttccgctccgc
ttaatagataaattattgttcatatacaactacgtcgaaatggcaagagtgacagggacc
cccttcgtttacctccttacgagaggtcaacaaattaaagtcacctctcaactgtaccgc
aaatgtaaagaattgaattatgtcatccctagtacgtatataaaatctggtagcaatgaa
aagtatgaaggagctaccgttttagaacccataaaagggtactacatagaacccatttcc
acgctcgattttgcatcgttgtacccatctatcatgatagcacataatctgtgctactcc
accttggttaagaataactcagagatcgagggactcaaacaagaagaagtcacctccatt
caaggaaagggaaacataaaatttgtgaagagatccgtaaagaagggaatactcccctta
atcgtagaagaattaatagatgcaagaaaaaaagtcaaacttctcatcaaaaatgaacag
aacaaaattacaaaaatggtactcaacggaaggcagctggcactcaaaatttcagccaac
tctgtatatggatacacgggtgctgcttcggggggacaactcccttgcttagaagtcgca
gtctctattaccacccttggaagatccatgattgataaaacgaaagaaaccgtggagaaa
tactacagcaggagcaacggatttgaatacaactccaccgtggtctatggagacacagac
tcagttatggtcaaatttggtaccaacagcattgctgaagcaatggccttaggaaaggac
gctgcacaaaggataagcaaggagtttcttcatccgattaagttagaatttgaaaaggtc
tactgcccttacctattgctcaacaaaaaaaggtacgctggactcctctacaccacccca
gaaaaacacgacaaaatggattgcaaaggaatcgaaacagttaggagagacttctgcatc
cttattcaacaaatgatggaaacggttttgaataaacttctgattgagaaaaatctcaac
agtgccatagagtatacaaaaagcaaaattaaggacctccttacaaataatatcgatatg
agtctcctcgtggtaacaaaatctttgggaaagactgactacgagactcgacttccacac
gtagagttagcaaagaagttaaagcaaagagacagtgccactgccccgaatgtaggagat
cgagttagctacattatagtcaaaggggttaaaggacaagcacaatacgaacgagcagaa
gatccactctacgtcctagacaataacctagccattgattacaaccactatctagatgca
attaaaaatacgctttcaagaatttttgaagttattatgcaaaactcagactctcttttt
tgtggtgaacacacaaggcacaaaacgattctaacttccagccaaactgccctctcaaaa
tttttacaaaaggcagtccgttgcatcggttgtaatagctctattaagaagccccctctt
tgcaaccactgcaaaatgaataaggagttctccatttatatgcaaaaaatgaatcacttc
aaaaccaaacagaatgagttttttcagctctggactgagtgccaacggtgccagggcaac
ctccacgctgaggtcatttgcatgaatagggactgccccatcttttaccggcgagccaaa
attaagaaggacatggccaacgttcaggagcagataagtgccctgcgcgccgactggtga
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