Plasmodium cynomolgi: PCYB_061820
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Entry
PCYB_061820 CDS
T02490
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 homolog
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pcy
Plasmodium cynomolgi
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcy03021
]
PCYB_061820
03036 Chromosome and associated proteins [BR:
pcy03036
]
PCYB_061820
Transcription machinery [BR:
pcy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
PCYB_061820
Chromosome and associated proteins [BR:
pcy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
PCYB_061820
SLIK complex
PCYB_061820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
REV
Motif
Other DBs
NCBI-GeneID:
14691921
NCBI-ProteinID:
XP_004221397
UniProt:
K6UTL7
LinkDB
All DBs
Position
6:complement(<394386..>403361)
Genome browser
AA seq
2882 aa
AA seq
DB search
MSGNKPGGSGGSSANMRDAMHYGEMMEADNAGGMKGTAAPNNYMNQVNSGKNLPCTSPPS
YLNSTNSVGMGKGSHFNPIPSGGDGTISITSSLLSSNEQNVQMRQQMGMNKNCGGTSAAG
GSSSGASASGGAAGMHESYQKPILSSYNMNSMQVQSTMGGHHMVSANQAGGNGTNHMGGR
YSNMNYPMQDMNPNVHMNSGKGAHTNNEMKHSSKDPNFLGTNNIKPNSFVNNMYYQRNDM
MLRNSSNSYNMHGNFYGNSSSGGNAGSGMNASQLNVGSRTRNSSGVNAIGGSNSNNSGGN
LSGGNNNLGAKSMSKGSTGGGGAGAMNVDSTGMPNNVMMNMVNNNVMMNSKVMNSMMMGS
GAAGSGGAKNAIGAGGLPGMNMAGMNMSGMNMGSMGMGGMSMGGMGGMHGKGMNGMPSHR
SSSAMEKGNSLGDVNGMRYHHPMGGAGASNVYNKMGFNHLSDNPYDNYAANHMSAKSECG
PMGKDSKGGTLGGKNASKHGKGGKNIKDELLDKDGTMGMMNSGSLLSEGKGKSTGGGTST
RKGKATVGAAGGVATSSIEQFNGSGMMSNDQQSAGVYKKYGKNGENQVDVKDKKMGSSNS
GSAVSGGGEATMSSGGASHPYNLFPNYNLKYPMGVDMFGSMGTTPYGMPSKGGGGAYPNM
NMMNGVSGTSGGNEMTSSGGNGSTSAGSSYGGLNKLGSMNSYNMMNAYGDNRYSNLKSMD
PMKSFNDGMVMGGGAGGAAHHGSSNLGSMMSMGNMGNMGNVGNVGNYNSLNNFMHSRNYP
NDMNMRMLSGRGVMGVNNPASMCNNQGSMMMMGGGGVGAAGAGGVGMHANPSRNSRFKNE
EGEDEEYEDEDVHGGSSLYGGSKYMRKSAHGKQTNKSRKSETQKKEKKKKKKKKHTNNSL
DTDEDEDNELYVNTYVKKSHTKSSSKKSQLYDPVEDRYNERAKRNEKNDIFVSPYIGTVE
GRTNLRERRKVNNYAQMESYFETDEEDKKVDEEKMLLRQEKQIMGGIDRVLHHRRIIDYE
NVNNIKNNPFLYINKGSASEGAAGGEAGGGAPGEGADGGGAPGGAPEGPPGKGAGPNEQE
DPTTDDFYEEEDIDDVSQVEFLIKWMGKSHIHNFFCTYDYLKNFNGLKKVDNYIKKIKQS
FQKRKYMTADEIEQEKIYSEIKKQIEMDAIHAERIVTHRMCEVTGEQLFLVKWMSCAYDQ
CTEETRQTLVDHGFIKLIEEYFDRESKICGVKAISSTWNRGPLTATKFDPYNETPFYLNE
KKLRAYQLTGLNWMVSRMKRNLSVLLADEMGLGKTVQTIAVVGHMLYKEKLIGPYLVIVP
QSTVDNWLNEFKSWLPQANVVCYHGNAVSRELIRTHELKKVYVPNRGYRYKFDVCITTPS
ILNSLSDVELLKKMPWQLMVVDEAHQLKNRQSKRFIELKQFMAESKLLLSGTPLHNNLEE
LWTLLHFLNPQQYTHYENFQKKYNEIENTSLIGEAKQKQLMQLQHELHEVILRRVKKDVE
KSLPNKVERILRVELSPIQIEFYKNILTKNYEQLAKASGGAKNSLQNICMELKKVCNHPF
LCCEPVDKDEYKERLVYSSGKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLRG
FKHQRLDGTMSKEMRKKAMNHFNSKNSDDFVFLLSTKAGGLGINLTSADTVIIYDSDWNP
QNDLQAGARAHRIGQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGLNKKQNDNV
NYIGGEGGNTSNGFTREELSKILKFGAQKLWEKNSSKYSPQKADEEKTVIKGVDVDLDKI
LEEAEAHENANNANKDLNSEFNSLHNSNNLFSGGNNLFGNGTNGTASGTGTGGGGGGGIA
DDLLSSYNNITEFKYEPPANLKSNIYNDSTKADELEEEEQNDKDFWDRTIPLEERLKLKR
MKEEELLVHGPRKTRTRENHSRHNMYVDTSANTQMANEDDDDSEEYTIKYLDKSKHLKKK
RKRRTSTHITEKDKFRLYRSLLKFGNPYLRLDDIRVDSKLTKVDQNVILTELNIIVDTCK
EIVEKVARESSLKVNEEGGIVAADGVEGAVIDVAAGVEDEEEEEEEGRAVKRVKDEADIK
LLKEEENINTTTTTDSNHLTVASCDDSSGKKLEEGADDVGAVADSAKSYEEKGGEAPGEV
AAGEVAAGEVAAGGATSSGVPASGVTTSGGGLFSKFLNLVKGQGDEEKVAAVKGEMKKEV
KDARDAEEANGKENDNNSNEDSDGNNKAKGTERGRKIDAYTFHIGTNRANALDLCQRLQL
FKSLHEFVKEQNGGNEYSFRLPLRGSSSASASVSSGALEEGKQQQGKQQPGKQQPGKQQP
GKQQPGKQQPGKQQPEQSQEKTELELAGEVKAEMKAEMKAEMKAEMKAEMKAEVKAEEGE
DGEEGEVKKEPASDAVASGTAQTKEEVSDYLKLKLPDYIFNHLRDLATKDVKAWSKEDDE
NLIKGVYVYGFGAINEICSDVNLNLGHIKNVKCDKVKMRCVRILKMIEEFNSNVKDETTS
RKRRRVRNRNRNRNNEVTKGEEKGVGAGAGTTSSCRKVKQEEEEIGAADVVTGSTGGTNS
MVKGSSGSNHRQSYYSRRSSERVKAIYVHDDKEDGVVTKKRAVCLSGASIKRGEKGEKAE
KAEKAEHINGGESTTLHSERRKGGTRSGSAAKGERSANHSHPHNNNNNSSGGVGSVGTMG
SLRSLGSVGSFGSLGSNTINNNRKNNRPGGGESSECTSSNENQAFGSKEDGDQAVKGIMG
GTGAPESSGAHRRSHRSSSNSGKKYNSAVQESGKMTRRKSSRVRRGKNEASSALATGKSN
AVTSNEGEYLGSYVDLSINTEGGAGIGALEGEDKQMEGQVEGQMEGQMEGQLDDQLDDEE
VR
NT seq
8649 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcaacaagcccggcggcagcggtggtagcagtgccaacatgcgtgatgcgatg
cactacggagaaatgatggaagcggacaacgcaggtgggatgaagggcacggcggcacca
aacaattacatgaaccaagtaaacagtggtaagaacctgccctgtacatcccccccttcc
tacctgaacagtaccaacagcgttggtatgggaaagggtagccacttcaatcctatcccc
agtggtggcgacgggacgataagtataacgagcagcctactaagtagtaatgaacagaac
gtacagatgaggcagcagatgggaatgaataagaattgcggaggtacatccgctgcaggt
gggtctagttctggtgctagtgcatccggaggagcagcaggaatgcacgagtcttatcag
aagcctattttatcatcctataacatgaacagcatgcaagtgcagtcgactatgggaggt
caccacatggttagtgccaatcaagcaggtggcaatggcaccaaccacatgggaggtaga
tacagcaatatgaattaccctatgcaagacatgaaccctaatgttcatatgaacagtgga
aaaggtgcccatacaaataacgaaatgaagcatagtagtaaggatcccaattttttggga
acaaataatataaaaccgaacagctttgtgaataatatgtattatcaaaggaatgacatg
atgttaaggaacagttccaatagctacaatatgcatgggaacttctatggtaacagcagt
agtggcggaaatgctggcagtggcatgaatgcgagtcaattaaatgtgggaagtaggact
cgcaatagtagcggcgtgaacgctattggaggaagtaacagcaacaacagcggtggtaac
cttagcggtggtaacaacaacctcggcgcgaagagcatgagcaaggggagcaccggaggt
ggaggcgcgggagcgatgaacgtcgactccacagggatgcccaacaatgtcatgatgaat
atggttaacaataacgtcatgatgaatagcaaagtgatgaatagcatgatgatgggtagt
ggtgctgccggttctgggggggccaaaaatgccattggagcaggaggtctcccagggatg
aatatggccggtatgaatatgagcggtatgaacatgggtagtatgggtatgggtggaatg
agcatgggtggcatgggaggcatgcatggcaaaggaatgaacggcatgccgagccatcga
tccagtagcgcaatggagaaaggaaattctttaggtgatgtgaacggcatgagatatcac
catcccatggggggagcaggagcaagtaacgtgtacaacaaaatggggttcaaccatttg
agtgacaacccgtatgataattatgcagcgaatcacatgtcggctaagagcgagtgtggc
ccgatgggcaaggacagtaagggtggtacccttggaggaaagaatgccagcaagcatgga
aagggtggaaaaaatataaaggatgaacttttagataaggatggcaccatgggcatgatg
aacagcggctccctgctgagtgagggcaaaggcaaatccaccggggggggaacatccacc
aggaaggggaaagcaactgtaggggcagcgggcggagtagccacttcctcgatagagcag
ttcaatggtagcggaatgatgagtaatgatcagcagtcggcaggggtgtataagaagtac
ggcaagaatggagagaaccaagttgatgtgaaggataaaaaaatgggaagcagtaatagc
gggagtgctgtcagcggaggaggagaagcaaccatgagcagtggaggagcaagtcatccc
tacaacttgttcccaaattacaatttaaaatacccaatgggtgtcgatatgtttggcagc
atggggactaccccttatggaatgccgagtaagggaggaggaggtgcttacccaaacatg
aatatgatgaatggggttagtggaactagtggaggcaacgaaatgactagcagcggtgga
aatggtagcacctctgctgggagttcttacggaggactgaacaaactaggcagtatgaac
agctacaatatgatgaacgcctatggggacaataggtacagtaacttaaagtctatggat
ccgatgaagtcgttcaacgacgggatggttatgggaggaggagcaggaggagcagcccac
catggaagtagcaaccttggcagtatgatgagcatgggtaacatgggtaacatgggcaac
gtgggcaacgtgggtaactacaacagcttgaacaacttcatgcacagtcgcaactatccg
aacgacatgaatatgagaatgctcagcggtagaggagtgatgggggtgaacaaccccgcg
agcatgtgtaacaatcagggcagcatgatgatgatgggtgggggaggtgtcggtgcagca
ggagcggggggagtaggaatgcacgcgaaccccagtcgtaactccagatttaagaatgaa
gaaggggaggatgaggaatacgaagatgaggatgtgcatggtgggtcgtccctttatgga
ggaagtaaatacatgaggaagagtgcacatggaaagcaaacgaacaaatcgagaaaatcg
gagacgcaaaagaaagagaaaaaaaagaaaaagaaaaaaaaacacacaaataactccctc
gatactgatgaagatgaagacaatgagctgtatgtcaacacgtatgtgaagaagtcccat
acaaagagcagtagtaagaagtcccagctgtatgaccctgtggaggatcgatacaacgaa
agggccaaacggaatgagaaaaacgacatttttgtatccccctatattggcaccgtggaa
ggaagaaccaatttgagggaaaggaggaaggtgaacaattacgcacagatggaaagctac
ttcgaaacggacgaggaggacaagaaggtagacgaggaaaaaatgctgctcaggcaggag
aagcagatcatgggaggcatcgaccgtgtgctgcaccacaggaggatcatcgactacgaa
aatgtgaacaatataaagaataatcccttcctgtacatcaacaaggggagtgcctcggag
ggtgcagcggggggagaagccggtgggggagcacccggcgagggagcagacggtggagga
gcacctgggggagctcctgagggaccacccggcaaaggcgcggggccgaacgagcaggag
gaccccacgacggacgatttttacgaagaagaagacatcgatgacgtaagtcaggtagag
ttcctaatcaaatggatgggaaagtctcacatacataattttttctgtacatatgattac
ttaaaaaattttaacggactaaaaaaggtagacaattatataaagaaaataaagcagtca
tttcaaaagaggaaatatatgacagctgatgaaattgagcaagaaaaaatatactcggag
attaagaagcaaatagaaatggatgcaatccatgcagagaggatagtaactcacaggatg
tgtgaagtgactggtgagcagctgtttcttgtgaaatggatgagctgtgcttatgatcag
tgtacagaagaaacaaggcagacgttagtagatcatgggtttattaaacttattgaagaa
tattttgatagggaaagtaaaatctgtggagtgaaggccatttcaagtacatggaatagg
ggacctctaacagccacaaagtttgatccgtacaatgagactccattttatttgaatgaa
aaaaaattgagagcgtaccaattgacaggtcttaactggatggttagccgaatgaaacga
aatttaagtgtcctattagcagacgagatgggattaggaaaaacggtgcaaactattgca
gtggtgggtcatatgctatataaagagaaattaattggtccttatcttgtaatcgtaccg
cagtccactgttgataattggttgaatgaattcaagagttggcttccccaagcgaatgtc
gtatgctatcatggaaatgccgtcagtagagaactcataaggactcacgaattgaagaag
gtctacgtacctaataggggctatagatacaaatttgatgtttgcattacgactccatct
attttgaacagcttgagtgatgtggagttgctcaaaaagatgccttggcaattaatggtg
gtggatgaggctcatcagttgaaaaaccgccaatcgaagaggttcatcgagttgaagcag
ttcatggctgaatcgaagttactccttagtggtacccccctgcacaataacttggaggaa
ctgtggactctgctgcatttcctaaacccgcaacagtatacacattatgagaattttcaa
aagaaatacaacgaaattgagaacactagtctgattggggaagcgaagcagaagcagttg
atgcagttacaacacgagttgcatgaagttatcctgaggagagttaaaaaggatgtagag
aagtccctacccaataaggtggaacgaattctcagagtagagttatcacccattcagata
gaattttacaaaaatattttaacaaaaaattatgaacagctagccaaagcgtctggtgga
gccaaaaattcgcttcagaatatttgtatggaattaaagaaagtatgcaaccatccattt
ttgtgttgcgaacctgtagacaaggatgagtataaagaacgactggtttattcaagtggg
aaaatctgccttctggagaagctactaatcagattgaaggagagaggaaaccgcgtcctt
attttctcccaaatggtgaagatgctaaatatcctgagtgaatatttaaccttaagagga
ttcaaacatcagaggttagatgggacgatgtctaaagaaatgagaaaaaaagctatgaac
cattttaatagtaaaaattcggatgattttgtattccttttgtcgactaaagctggtggg
ttgggaattaatctaacttcagcagatactgtcattatttacgattctgattggaatcca
cagaatgatttgcaagcaggtgctagagctcatcgtattggacaaacgaaaacggtgcag
atttacagactagttactaaggactcgattgaacagaccatcctcgaaagagctaaagtt
aaaatggttttagatactctagtcgttcaaggactgaacaagaagcaaaatgataacgtg
aactatatcggtggagagggaggaaatacgtcgaatggattcactagagaagaactctcc
aaaattttaaaattcggtgcacagaaattgtgggaaaaaaacagctccaaatattcccct
caaaaagcagatgaagaaaaaacagttattaaaggagtagatgtggacttagataaaatt
ttagaagaagctgaggcacatgaaaatgctaacaatgctaacaaagatttaaattccgaa
tttaatagtctgcacaattcgaataacttgttttcaggtggaaataacctctttggaaat
ggaacaaacgggacagcatccggtacaggaacaggagggggaggaggaggaggaattgca
gatgatctactcagctcgtataacaatattaccgagtttaagtatgaacctcctgccaat
ttgaagagtaatatatataatgactccactaaggcagacgagttagaggaggaagaacaa
aatgacaaagacttctgggatcgaactatcccattagaagagagactaaaattgaagaga
atgaaagaggaagaactgttagttcatggacctcgaaaaaccagaacccgagagaatcat
agtcgacacaatatgtatgtggacacaagtgcgaacacacaaatggctaatgaagacgat
gatgacagtgaggagtataccataaagtatcttgacaagagtaaacacttgaagaaaaaa
agaaagagaagaacatctactcatataacggagaaggataagttccgattgtacagatca
cttcttaagtttggaaatccttatctacgtttagatgatattcgagtagattccaaactc
accaaagtggaccaaaatgtgattctcacagaacttaatatcattgtagatacttgcaaa
gaaattgtagagaaggttgctagggagagctctttgaaggtgaacgaggagggtggaata
gtcgcagcggatggagttgagggggcagttattgatgttgcagcgggagtggaggatgag
gaggaagaggaagaagaaggaagggccgtcaaacgagtgaaagacgaggcggatatcaag
ctgttgaaggaggaagaaaatattaacaccactacgactactgatagcaaccatttgaca
gtcgcctcgtgtgatgattcgagcgggaagaaattggaggagggagcagacgacgtgggt
gctgttgccgatagtgccaagtcgtatgaggagaaggggggtgaagcaccgggcgaagta
gccgctggagaagtagccgcgggggaagtagccgcgggaggagcaacctcgagtggagta
cccgccagtggagtaaccaccagtggagggggtctcttttccaagttcctgaatttggtg
aagggccagggtgacgaggagaaggtcgcggcagtcaagggggaaatgaagaaggaagtg
aaggacgcgagggacgcggaagaagcgaacggaaaggaaaacgacaataactcgaatgag
gacagcgatggaaacaataaggccaagggtacggaacggggaaggaaaatagacgcctat
accttccacattggtacgaacagagccaacgccttggacctgtgtcagcggctgcagttg
tttaaaagcttgcacgagtttgtgaaggagcagaatggtggaaacgagtatagcttcagg
cttcccctgagaggcagcagcagcgccagtgccagtgtgtcctccggagctctggaggag
ggcaagcagcagcaggggaagcaacagccggggaagcaacagccggggaagcaacagccg
gggaagcaacagccggggaagcaacagccggggaagcagcaaccggagcaatcgcaggag
aaaaccgagttagagttagcgggtgaggtgaaggctgaaatgaaggctgaaatgaaagcc
gaaatgaaagccgaaatgaaagccgaaatgaaagccgaagtgaaggcggaagaaggagaa
gacggagaagaaggagaagtaaagaaagagcctgccagcgatgcagttgcttcaggaacc
gcacaaacgaaggaagaagtaagcgactatctaaaactgaagctacccgactacatattt
aaccacctgagagacctcgcgacgaaggatgtaaaggcatggtcaaaggaagacgatgaa
aatttaatcaaaggagtatacgtatatggatttggagctattaacgaaatctgctcagat
gtgaatctaaatctgggtcatatcaagaatgtgaaatgtgacaaagtgaagatgagatgt
gttcgtattttgaaaatgatagaagaatttaattcgaacgttaaggacgagacgactagt
aggaaacggagaagggtgcgaaacaggaataggaataggaacaatgaagtgactaaaggg
gaggagaaaggcgtaggagctggtgcaggtacaactagcagttgtaggaaggtgaaacag
gaggaggaagaaattggagcggcggatgtagtaaccgggtcgacagggggaacaaacagc
atggtgaagggaagcagtggaagtaatcataggcaaagctactacagcaggaggagcagc
gaaagggtgaaagctatttacgtgcatgatgacaaggaagacggagtggttacgaagaag
agagctgtttgcctttcaggggcgtccataaaaaggggtgaaaagggagaaaaggcggaa
aaggcggaaaaggcagagcacatcaatgggggggagagtaccaccctccatagcgagcga
aggaaaggtggcacacggtcagggtcagccgccaaaggtgaaaggagtgccaatcacagc
cacccccacaacaacaataacaatagcagcggcggtgtgggaagcgtggggaccatgggg
agcctacgaagcctcggcagtgttggcagctttggaagccttggaagcaataccattaat
aataacaggaagaacaaccgcccgggggggggagagagctcagagtgcacctcgtccaac
gaaaaccaagcctttggcagtaaagaagatggagaccaggccgtcaaaggtattatgggt
ggcacaggggcaccagaaagcagcggcgcgcacaggagaagccacagaagtagtagtaat
agtggaaaaaaatacaacagtgctgtccaggagagtggaaaaatgactcgaaggaaaagc
tcccgagtgagaagaggaaagaatgaagcatcatctgctcttgccacagggaaaagcaat
gcagttacctcaaatgaaggtgaatacttaggcagttacgtagatctgagcattaatacc
gagggaggagcaggaataggggcgctggagggagaagacaaacagatggagggtcaagtg
gagggccaaatggagggccaaatggaaggacagttggatgaccaattggatgacgaggag
gtcagatga
DBGET
integrated database retrieval system
