Plasmodium cynomolgi: PCYB_062150
Help
Entry
PCYB_062150 CDS
T02490
Name
(RefSeq) DNA-directed RNA polymerase II
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03020
RNA polymerase
pcy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PCYB_062150
09124 Replication and repair
03420 Nucleotide excision repair
PCYB_062150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcy03021
]
PCYB_062150
03019 Messenger RNA biogenesis [BR:
pcy03019
]
PCYB_062150
03400 DNA repair and recombination proteins [BR:
pcy03400
]
PCYB_062150
Transcription machinery [BR:
pcy03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
PCYB_062150
Messenger RNA biogenesis [BR:
pcy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PCYB_062150
DNA repair and recombination proteins [BR:
pcy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PCYB_062150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
MOV-10_N
Motif
Other DBs
NCBI-GeneID:
14691723
NCBI-ProteinID:
XP_004221430
UniProt:
K6UJ09
LinkDB
All DBs
Position
6:complement(553823..554543)
Genome browser
AA seq
177 aa
AA seq
DB search
MYFVIEEWKNVIIKPSQLGPRYQQFIEDMLRNSVEGQCNAKYGYIICVIRIIHSEPGRVQ
DGTSMIVVKVKYQAIVFKPFKDEVLDAVVTDVNKLGFFAQAGPLKIFISRTAIPKYFEYS
EDSHYPCFSSGVYNIKPQTTVRIKLQGIRYDLSNMFAIATINNEYLGCIESNTLQVM
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgtacttcgtcatagaggaatggaaaaatgtaataataaagccaagtcagctgggcccg
agataccagcagtttatagaagatatgctgcgaaacagtgtagaaggtcagtgcaatgcc
aagtatggatacataatttgcgtcatccgtataattcatagtgagcctggacgtgtacag
gacgggacgagcatgatcgttgtgaaggtcaaataccaggccatcgtcttcaagccgttt
aaggacgaggtactggatgcagttgtgacggacgtaaacaaactgggcttcttcgctcag
gcaggcccgctcaaaattttcatatcgagaacagccattcccaagtacttcgaatactcg
gaagattcccactacccctgtttttcctcaggagtgtacaacataaaaccgcagacaaca
gtgaggataaaactgcaaggtattcgctacgacttgtcgaacatgtttgcaatagccacc
attaacaatgagtacctgggatgtatcgagtcgaacacattgcaagttatgtga
DBGET
integrated database retrieval system