KEGG   Plasmodium cynomolgi: PCYB_062150
Entry
PCYB_062150       CDS       T02490                                 
Name
(RefSeq) DNA-directed RNA polymerase II
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
pcy  Plasmodium cynomolgi
Pathway
pcy03020  RNA polymerase
pcy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PCYB_062150
  09124 Replication and repair
   03420 Nucleotide excision repair
    PCYB_062150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcy03021]
    PCYB_062150
   03019 Messenger RNA biogenesis [BR:pcy03019]
    PCYB_062150
   03400 DNA repair and recombination proteins [BR:pcy03400]
    PCYB_062150
Transcription machinery [BR:pcy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     PCYB_062150
Messenger RNA biogenesis [BR:pcy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PCYB_062150
DNA repair and recombination proteins [BR:pcy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PCYB_062150
SSDB
Motif
Pfam: SHS2_Rpb7-N S1 MOV-10_N
Other DBs
NCBI-GeneID: 14691723
NCBI-ProteinID: XP_004221430
UniProt: K6UJ09
LinkDB
Position
6:complement(553823..554543)
AA seq 177 aa
MYFVIEEWKNVIIKPSQLGPRYQQFIEDMLRNSVEGQCNAKYGYIICVIRIIHSEPGRVQ
DGTSMIVVKVKYQAIVFKPFKDEVLDAVVTDVNKLGFFAQAGPLKIFISRTAIPKYFEYS
EDSHYPCFSSGVYNIKPQTTVRIKLQGIRYDLSNMFAIATINNEYLGCIESNTLQVM
NT seq 534 nt   +upstreamnt  +downstreamnt
atgtacttcgtcatagaggaatggaaaaatgtaataataaagccaagtcagctgggcccg
agataccagcagtttatagaagatatgctgcgaaacagtgtagaaggtcagtgcaatgcc
aagtatggatacataatttgcgtcatccgtataattcatagtgagcctggacgtgtacag
gacgggacgagcatgatcgttgtgaaggtcaaataccaggccatcgtcttcaagccgttt
aaggacgaggtactggatgcagttgtgacggacgtaaacaaactgggcttcttcgctcag
gcaggcccgctcaaaattttcatatcgagaacagccattcccaagtacttcgaatactcg
gaagattcccactacccctgtttttcctcaggagtgtacaacataaaaccgcagacaaca
gtgaggataaaactgcaaggtattcgctacgacttgtcgaacatgtttgcaatagccacc
attaacaatgagtacctgggatgtatcgagtcgaacacattgcaagttatgtga

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