Plasmodium cynomolgi: PCYB_074140
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Entry
PCYB_074140 CDS
T02490
Name
(RefSeq) DNA excision-repair helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03022
Basal transcription factors
pcy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PCYB_074140
09124 Replication and repair
03420 Nucleotide excision repair
PCYB_074140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcy03021
]
PCYB_074140
03036 Chromosome and associated proteins [BR:
pcy03036
]
PCYB_074140
03400 DNA repair and recombination proteins [BR:
pcy03400
]
PCYB_074140
Enzymes [BR:
pcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PCYB_074140
Transcription machinery [BR:
pcy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PCYB_074140
Chromosome and associated proteins [BR:
pcy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PCYB_074140
DNA repair and recombination proteins [BR:
pcy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PCYB_074140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
ResIII
DEAD
NPHP3_N
AAA_11
AAA_19
Motif
Other DBs
NCBI-GeneID:
14692261
NCBI-ProteinID:
XP_004221860
UniProt:
K6UJF8
LinkDB
All DBs
Position
7:1366543..1369711
Genome browser
AA seq
738 aa
AA seq
DB search
MVVFQLDDLEVFFPYDYIYPEQYAYMRYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSY
QYGKNDEGKFIFCTRTHEREKIDEECRKLTATFIREKKYINQKINKLGNAHSDRDRISEF
IVKNKQHIDVEDYFDIYNTSNSLEEYNEIGLCGYFENYKKEFQFELIQPGVYTIEDLKIL
CKGYKNAQNVSVPICPYFCAKKIIEVAKVIVLNYQYVIDPKVSKSLFIGRDVNNRVNLQK
NDIIVFDEAHNIDSVCLEALSLKLLGQSTEQPITSEKKDQTAVSSLFPEESKDYSLLTNS
NNEGGEDPTELHYSPLLMEDIVKNVIIPGNIRKAEHFLNLMRVVVMYLKKYVNIYEITSE
GPLSFLYKCERETKLDTSFFKFCFDRLKGILNALQIVNVEDYSALNIVCNFCTLLGSYFQ
GFIIICEPYPEATGIYDPVIQFACLDSSIAMKSVIKKYRSVILTSGTITPLELYPKLLNF
KTVLTASFPMSFDRNCVCPLIVTKSSDLVPLSSQFSLRSDITVIKNYGMLLVEMCKTIPD
GIVAYFPSYIYMEEVISSWYELGIITSILDHKLVFIETKDIVSTTIALHNFKRACDLGKG
AVFLSICRGKIAEGIDFDKHYGKCVILFGIPYQYTLSRILKSRLDFLKETYNIQENEFLT
FDAMRQASQCVGRIIRNKKDYGIMIFADIRYARNDKKSKLPPWIIKCMDMSNVNLTVSTA
VNISRKFLLNMSQEYKET
NT seq
2215 nt
NT seq
+upstream
nt +downstream
nt
atggtggttttccagctggacgacctggaggtcttcttcccctatgactacatataccct
gagcagtatgcctacatgcgttacttgaagaagacgttggatagcgagggacactgtgtg
ctggagatgccaacaggcacgggaaaaacggtggctattttctcccttataacgtcctat
cagtatggaaagaatgacgaggggaaattcattttttgcacgcggacgcacgaacgagag
aagatagacgaggagtgccgcaaactgacagcgaccttcatccgggagaagaagtacatc
aatcaaaaaataaataaattagggaatgcacactcggatagggatagaatctccgaattc
atcgtaaaaaataaacaacacatagatgtagaggattatttcgacatttacaacacgagt
aactccctggaggaatacaatgagatagggttgtgtggttattttgagaattacaaaaag
gagtttcaattcgagttgatccagccaggtgtgtacacgatagaagacttgaaaatactt
tgcaaagggtataaaaatgcacagaatgtaagcgtccctatttgtccctacttttgcgca
aaaaaaattatcgaagtggccaaggtaatcgtcttaaattaccaatacgtaatcgaccca
aaggtatccaagtcgttgtttattggaagagatgtaaacaaccgagtgaatctacaaaaa
aacgatattatcgtgtttgatgaggcacacaatattgacagcgtttgtctggaggcactg
agtctgaagctgctaggtcagtcaactgagcagccaatcacatcggaaaaaaaagaccaa
actgcagttagtagtctattccccgaggagagtaaagactactctctgctcactaatagc
aataacgaaggaggagaggacccaacggagctacattacagtcccctgctaatggaagat
atcgtaaaaaatgtaataatcccaggaaacatcagaaaagcagaacacttcctaaatctg
atgcgggtagttgtaatgtacctgaaaaaatatgtcaatatttacgaaataacatcagaa
ggtccactttcctttttgtataaatgtgaaagggagacaaaacttgacacttcttttttt
aaattctgtttcgatcgattgaagggtattttgaacgcgttgcagatagttaacgtggag
gactactcggcattaaatatagtatgtaatttttgcaccttgttggggagttacttccaa
gggtttatcatcatatgtgagccttatccagaagccacaggtatatatgaccctgtgatt
cagtttgcatgtctagactcatccatagcaatgaagtcagttattaagaaatacagatcg
gttattctgactagtgggacaattaccccattggagttataccctaagctgttaaatttc
aagacagtgttgacagcgtccttcccgatgtcgttcgataggaattgtgtgtgtcctctt
atcgttactaaaagctcagatctcgttccattatcctctcagttttctctacgaagtgat
ataactgtgattaagaactacggaatgctactagttgagatgtgcaaaacgattcctgat
gggattgtagcttacttcccatcgtatatctacatggaggaggtcatctcctcatggtat
gaactaggtatcatcacaagtatcctcgatcacaagttagtgtttattgagacaaaggat
atcgtatctactacaatcgctttgcataattttaagagagcatgtgacttagggaaagga
gctgtttttctctccatttgtcgtggtaagatcgctgaaggtattgactttgacaagcac
tatggtaagtgtgtgatcctttttggtatcccctaccagtataccttatctcggattctc
aaatcgagactggactttctaaaagagacatacaatatccaggagaatgagttcctaacg
ttcgatgcgatgagacaagcttctcagtgtgtcggtcgtatcatacgaaataagaaggac
tacgggattatgatttttgctgatattcgatatgcacgcaatgataaaaagagcaagctg
cctccctggatcatcaagtgcatggatatgtctaacgtaaatctcaccgttagcacagct
gtcaatatttctcgcaaatttctgctcaacatgtcacaggagtataaggagacgg
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