Plasmodium cynomolgi: PCYB_081480
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Entry
PCYB_081480 CDS
T02490
Name
(RefSeq) regulator of nonsense transcripts
Organism
pcy
Plasmodium cynomolgi
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
UPF1_Zn_bind
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
UvrD-helicase
NPHP3_N
PhoH
SRP54
NAT10_TcmA_helicase
AAA_22
DEAD
SLFN-g3_helicase
nSTAND3
AAA_16
AAA
Motif
Other DBs
NCBI-GeneID:
14692337
NCBI-ProteinID:
XP_004221934
UniProt:
K6VA04
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All DBs
Position
8:complement(<265794..>270549)
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AA seq
1470 aa
AA seq
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MDNTFDYNQIDVDDFDDFYNFCTLKEKEKKKNGKKISEQFFERDVKNGENGTDDGDGEDS
TDNSSVDTTTINNEKVHSLQERNSCGDRTSNRYVSISSEDYEQDKKKMYEDYNARRKYPR
EGSQYSNSNCDSYSCSVDMTCVSKGNKEKPKYFRCRYCEMDSVDSVVQCNTCSRWFCNGS
YGTCGSHIVTHLVRSKHKEIKLHKKSLLGETILECYNCGCKNVFLLGFLPTPEEGVVVII
CRDPCLARCISLSGKDQGRGEMEQEEVNQNGGKPNGGKPIEEKPTGGKPNGKGNAADLKD
PPERETRKEKKKALPYEDFHAEEEPIGTDEDDVASTKEDTDMVKNKGYLSSDDFGYMSEQ
EKGSDGEGSSIGAFAAKKKSQSGKEKTEEDVIQKEDVIQKEDVIPKEDANPKEDSEAVSS
YCASVGNNLKELIKMKDWDLNKWQPVIEDRCLLEWLVNIPTAEEAERKGKRTTSYNVNKL
EELWKNKKDVYIDELDAEILNDEPVKVELRYKDAYHYQSIFAPLIQLEADYDKSIKEGQK
QANVTVRWDIGLNKKRYAHFIYVKEESELRLVAGDELKLSYTYPDGTIWSCEGHISRIHN
TEEIALELRTSSTANGPWVNNITTGYTVEFVWKSTAYDRMQLALNEFAQDSYSVSGYLYH
KLLGHEVTEESLNYYKTALSNQVHGKRTQRIVNYSAPNLAALNHSQIDAIKKSLVSPLSL
IQGPPGTGKTLTCATLVYHLSKTKMGKVLVTAPSNVAVDQLSVRIHKTGLKVVRLCAKSR
EYVPSIADYLYLHNQMKLLKSDIGEELNKLLELKEEVGELSQKDERRLKKLIFFAEYKIL
LEADVICTTCVGAMDKRLKRFRFSQVLVDEATQSTEPECLVPLVTGAKQIVLVGDHCQLG
PIIVCKKAANAGLGKSLFERLVMLGITPFRLEVQYRMHPALSEFPSYVFYDGCLQNGITL
KEREYPLKDFPWPNPKCPMFFYNSTGLEEMSASGTSYLNRAEASNMEKLVRTLINCGLKP
TQIGVITPYEGQRAYITSLFQKNISYQHSTEIEVASVDAFQGREKDFILLSCVRSNKKLG
IGFLNDPRRLNVALTRAKYGLIICGNAKVLSRHHVMIKRSYNSNETITNVNSVWINLLSQ
FKKKDLIVEGCLSNLKPMNIHIPTPTKQPSRYINFSYFLPNERPLRGGAFSGKSRSRSRS
RSRSGGSDRSGRSGRSGRSGRSGRSERSDGSHPGSDDCKTQNSSSFMRMNMSNLSYCSDE
VMNKDFLSYMHQRQGGGGKQVVKSYINNLSQHSQFNDYSVVNKNYPSDRFPSYEHAPSLS
NSTNKYASQNLICYNNSSVSLDRNRLANNLLDSSFRENFGGSFVRNSDMFPYLFHYGHNR
DSSSLHNGQGAHGSYESHGSHRSHGSHGLHESHGLHGLHGSHESHRLHTGKNAHGSHNPR
KPRSTGAHHGEIKQNRVNTAELRRYRNRNV
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atggataacacattcgactacaaccaaatagatgtggacgattttgacgacttttacaat
ttctgtaccttaaaggagaaggagaaaaaaaaaaatgggaaaaagatttcggagcagttt
ttcgagagggatgtgaaaaatggagaaaacgggacagacgacggagacggagaagacagc
acggataactcctcagtagacaccacgaccatcaataacgaaaaggtgcattccctccag
gagagaaacagctgtggggaccgcacttccaacaggtatgttagcatatcgagcgaggac
tacgaacaggataaaaaaaaaatgtacgaagattacaatgccaggaggaagtacccaagg
gagggaagccagtactcgaacagcaactgtgacagttacagctgtagtgttgacatgaca
tgcgtcagtaagggaaataaagaaaagcccaaatattttagatgtcgttactgtgaaatg
gattctgtggatagtgtggttcagtgcaacacctgcagtcgatggttctgcaatgggtcc
tatggcacgtgtggtagccatattgttacgcatctggtgagatccaagcacaaggaaatt
aaactgcataagaaaagcctactgggggaaaccatcttagagtgctacaactgtgggtgc
aaaaatgtgtttctgttgggctttctacccacccccgaggagggagtcgtcgtcattata
tgcagggacccttgcttagccaggtgcatatcgctgagtgggaaggatcaggggaggggc
gaaatggagcaagaggaggtgaaccaaaatggggggaagccaaatggggggaagccaatc
gaggagaagccaaccggggggaagccaaatgggaagggaaacgccgctgacctgaaggac
cccccggagagagagactaggaaggaaaaaaagaaagccctcccgtacgaagatttccac
gcggaagaggagccaattggcacggatgaagatgacgttgccagcacgaaggaagacacg
gacatggtaaagaacaagggctatctaagcagcgacgattttggctacatgagtgagcag
gagaaggggagcgacggggaaggaagttccattggggcgtttgcggcgaagaagaagagt
caaagcggaaaggaaaaaacggaggaggatgtgatccagaaggaggacgtgatccagaag
gaggatgtgatccctaaggaggatgcgaacccgaaggaggactctgaggctgtaagcagc
tattgcgcaagtgtaggaaacaatttaaaggaactgataaagatgaaagattgggatttg
aataaatggcaaccagtgattgaagacaggtgtctactagaatggctagtaaacatcccc
acagcggaagaagcagaaagaaaggggaaaagaaccacatcgtataatgtaaataagtta
gaagagctatggaaaaataaaaaagatgtatatatagatgagctagatgcagagatccta
aatgatgaacccgttaaggtagagctaaggtataaagacgcataccattatcagtccatc
tttgcaccattaattcagttggaggcagattatgataaatccataaaggagggtcagaag
caagctaatgtaacagtccgttgggatataggattgaataaaaaaaggtatgcccacttt
atttacgtgaaggaggaaagtgaactaaggttagtagcaggagatgaattaaaattgtca
tatacatacccagacggaacgatatggagttgcgaaggacatatttctaggattcacaac
acggaggaaatagccttagaattaagaacctctagtacggctaatgggccatgggtaaat
aacataacgacagggtacacagtcgagtttgtttggaaaagtacagcatatgatcgaatg
cagttagctttaaatgaatttgcacaagactcctactcagttagtgggtatttgtatcat
aaactactaggacatgaagtcacagaggagtcactaaattattacaaaacggcattgagc
aatcaggtgcatgggaagagaactcaacgtattgtaaattattctgcccctaacttagct
gcacttaatcactcacaaattgatgctataaagaaaagcttggtttctcccttgtctcta
attcaaggaccaccaggcacaggaaaaacgttaacctgtgctactctggtgtatcatttg
tccaaaacgaagatgggaaaagtattagtcactgccccgagtaacgttgctgtagatcag
ctttctgtaaggatacacaaaactggactaaaggtagtacgtctatgtgccaagagtaga
gagtacgtacccagcatagcagattatttatacctccataatcaaatgaaattactaaaa
tcagatataggagaagaactgaacaagttgcttgaattgaaggaagaagttggagagtta
tcacaaaaggatgaaaggagattaaaaaaattaattttttttgcagaatataaaatattg
ctagaggcagatgtgatatgtactacctgtgttggtgctatggataaacgattgaaacgt
ttccgatttagtcaagtgttagttgatgaagcgacacagtcaacagagccggagtgttta
gtacccctcgtgacaggagccaaacagattgtactggttggagaccactgccaattaggt
cccataatagtttgtaaaaaggcagccaatgcagggttgggaaagagtctattcgaacga
ttagttatgttaggcattacgccctttaggttagaagtccaatatcgtatgcatccagca
ttaagtgaattcccatcatacgtcttctatgatggttgtctccaaaatgggataactttg
aaggagagagaatatccactaaaggatttcccatggccgaatccaaaatgtcctatgttt
ttttacaactctacggggttggaagaaatgtctgcttctgggacgagctacttaaacaga
gcagaagcatccaatatggagaagctagtgaggactctcataaattgtggcttgaagcca
acccaaataggggtgataacaccatacgaaggacaaagagcttacataacttcccttttt
cagaaaaacatttcatatcaacattccacagaaatagaagtagcatctgtagatgcattt
caaggaagggaaaaagacttcatccttctctcctgtgttcgatcgaacaagaaattagga
atcggctttttaaatgacccaaggaggttaaatgtagcattgacgagggccaagtatgga
ttaatcatatgtggtaatgcgaaggtactgtccagacatcacgttatgataaaaagatct
tataactcgaatgagacgatcacgaatgtgaactccgtgtggattaatctcctcagtcag
tttaagaagaaggacttaatcgtggaggggtgcttatccaatttgaagccgatgaacatt
catataccgaccccgaccaagcagccgtcgaggtacatcaactttagttacttcctgccc
aacgagaggcccctccggggtggcgcattttccggaaagagccgaagcaggagcaggagc
aggagcagaagcggtgggagtgatagaagcgggagaagtggcagaagcgggagaagtggc
agaagcgggagaagtgaacggagcgatggaagccaccctggcagtgacgactgtaagacc
caaaacagcagctcgtttatgcgcatgaatatgtcgaaccttagctactgcagtgacgag
gtcatgaacaaggacttcctcagttatatgcatcaaaggcagggtggaggagggaagcag
gtagtaaaatcttacataaacaatttgagtcagcactcccaattcaatgactactctgtc
gttaataaaaactacccaagtgacaggttccccagttatgagcacgccccttctctttcg
aatagcacgaacaagtatgccagccaaaatttgatatgctacaataacagcagtgtgagt
ttggatcggaatcgtttagccaacaatttgttggattccagttttagagaaaacttcggc
ggcagcttcgtgaggaactcagatatgtttccgtacctgtttcactatggccataacagg
gactcctccagtctgcacaacgggcagggcgcgcacggatcgtacgaatcgcacggatca
cacagatcgcacggatcgcacggattgcacgaatcgcacggattgcacggattgcacgga
tcgcacgaatcgcacagattgcacactgggaaaaatgcacatgggtcacataatccgcgt
aagccgcgcagtactggcgcccaccacggggagattaaacagaaccgcgtcaacacagca
gaactaaggagatatcgaaatagaaatgtatga
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integrated database retrieval system
