KEGG   Plasmodium cynomolgi: PCYB_084050
Entry
PCYB_084050       CDS       T02490                                 
Name
(RefSeq) splicing factor putative
  KO
K12828  splicing factor 3B subunit 1
Organism
pcy  Plasmodium cynomolgi
Pathway
pcy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PCYB_084050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcy03041]
    PCYB_084050
   03036 Chromosome and associated proteins [BR:pcy03036]
    PCYB_084050
Spliceosome [BR:pcy03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    PCYB_084050
 Complex B
    PCYB_084050
 Complex C
   U2 SnRNP specific factors
    PCYB_084050
Chromosome and associated proteins [BR:pcy03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    PCYB_084050
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N Htt_N-HEAT_1 IFRD
Other DBs
NCBI-GeneID: 14692596
NCBI-ProteinID: XP_004222191
UniProt: K6USN1
LinkDB
Position
8:1418958..1423871
AA seq 1404 aa
MEAKRSECDAGKREGGKKHKYGKEEMNGGVHAEGHLSGDVQYDLEIETRLEDEDSANHIG
SGASGAGGTARRKHNHINVGNLKDEVVQNDFNNDDLDDKALGLVNDKSIRRRENEFQRRK
YDYMISPGRADPFGDKSPSPGERTYADVMMDVNKESNKMKLSSGGGKAGASGGTSSQAGG
NRRMRWGVTESSDAVGREPGESVTSSKSNEGIKKEQGKSKWDILSGEESKSTSFGNMATP
APSKWVDTPFILNDGGEVKKKKISRWDKVGEGTAAGAADSLAQSDMMKTPKVVPLGGLAA
GGVLSGGVAAGGATPGGMLKTPYLVPGSGNFVNTPYVLNQLGNASAMFTPMTPGVASQAI
DSIIKMKIKNEMEIRNRPLTDEDLDELLPSEGYEIVKPPEEYEAIRRNKLKAFFKTVAST
AGTPLLMGSSGVIGGVPASLQGEKTGEHSTGVMQTPYLNNNMMSSTLVGGTLPSGTPFYE
IPTATTSQMKDTEGGGGDTQTTLLQSRQFEINNPQLLSELKYVQLKNEDFIYFSKLFQTV
DESDLSQEELKERKLMILLLKIKNGTPSVRRAALRAITDKVKELGPEILFNLILPLMMHN
TLEDQERHLLVKVIDRILFKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAK
AAGLATMIGIMRPDIDHPDEYVRNTTARAFAVVASALGIPSLILFLKAVCQSKKNWEARH
TGIKIVQQIAILMGCAVLPHLRQLVSIVAHGLHDEQQKVKTITALAIAALAEAAAPYGIE
AFDSVLRPLWKGITEHRGKVLAAFLKAIGLIIPLMDPYHASYYTREVMVILINEFNSPDE
EMKKVVLKCVKQCIQTEGIEKDYINQEVVNPFFDKFWVLRTSHDKRNLHLIVETTVEISN
KIGGAAVIGRIVDDLKDPSEQFRKMVMQTIQSIVNNQGVDDIDQTLEEQLIDGILYAFQE
QASEDYYVLLNSFDAIVNKLQIRMKPYLPQIAGIIRWRLNTPLPKIRQQSAELIGRIASL
MHLCEEHQMLGHLALYLYEYLGEEYPEVLGNIIGALKSIVVVLGVHNMTPPIKDLLPRIT
PILKNRHEKVQENVIDLIGIIADKGGDLVSPKEWDRICFDLIELLKSNKKLIRRATIQTF
GYIARTIGPFEVLTVLLNNLRVQERQLRVCTTVAIAIVADTCLPYSVLAALMNEYRTQDL
NVQNGVLKALSFMFEYIGEIAKDYVYAVVPLLEHALMDRDLVHRQIATWACKHLALGCFG
LNREDALIHLLNYVWPNIFETSPHLIQAVIDSIDGFRVALGPAIIFQYLVQGIFHPSRKV
REIYWKIYNNVYIGHQDSLVPVYPPFERLADSNFARDELRYTLKLPRYWLFLFLTSGDRH
FLGGSYPSILSGGIFTCGVAVTKR
NT seq 4215 nt   +upstreamnt  +downstreamnt
atggaggcgaagcgcagtgagtgcgatgcggggaaacgggaaggaggaaagaagcacaag
tacggcaaggaggaaatgaacggaggggtccacgcagagggtcacctatcgggggacgtc
caatacgacctggagatagagacccgcctggaggatgaagactctgcgaaccacatcgga
agtggagcaagcggagcaggaggcacagcccgccgcaaacacaaccacataaacgtaggc
aacctgaaggacgaagtagtccaaaacgatttcaataatgatgacctggatgataaagcc
ctagggttagtaaatgacaaatccattagaagaagggagaatgagtttcagaggagaaag
tatgactatatgatatctccggggagggctgatccttttggagataagagtccatcccca
ggggagagaacctatgcagatgtgatgatggatgtaaacaaggagagtaacaaaatgaag
ctttccagcggtggtgggaaggctggtgcttcggggggtacgtctagccaagcaggaggg
aatagaaggatgaggtggggtgttacagaaagtagtgatgctgtagggagagaacctggg
gagtcagtcacgtcaagtaaatcaaatgaaggaataaaaaaggaacaaggaaaaagtaag
tgggatattctatccggagaggagagtaaatccaccagctttggaaatatggctactccc
gctccgtccaagtgggtggatacgcccttcatactgaacgacgggggggaagtaaagaag
aaaaagatttcccgatgggacaaagtcggggaagggactgctgcgggagcggcggatagc
ctcgcgcagagtgacatgatgaaaacgcccaaagtggtaccacttggtggattggcagcc
ggtggagtgctatccggtggagtggcagccggtggggccacccccggaggtatgctcaaa
acgccctacctcgtgccggggagcgggaacttcgtgaatacgccgtacgtgctgaaccaa
ttgggtaacgcctcagcaatgttcaccccgatgaccccgggagtggcctcccaggccatc
gactcgataataaaaatgaaaataaagaacgaaatggagatccgaaacaggccactaaca
gatgaggacctggacgaactgctgccctctgaagggtatgaaattgtaaagccccctgag
gagtacgaagcgataagaaggaacaaattaaaggctttttttaagactgtagcgagcact
gcagggactccccttctgatggggagtagtggagtcattggaggggttcccgcttctttg
caaggggagaaaacaggggagcactccacaggagtgatgcagaccccgtatttaaataac
aacatgatgagtagcacactggttggtggaacgttgcctagtggtacccccttttacgaa
attccaaccgctacgactagtcagatgaaggacacagagggaggaggaggagacacacag
acgacactcctacaaagtagacagttcgaaattaacaacccacaattgttaagtgagtta
aaatatgtacagctaaaaaatgaagacttcatctatttcagtaagctgtttcaaacagtg
gatgaaagtgatctatcacaggaagagctgaaggagaggaagctaatgatacttttactt
aagataaaaaatggaacgccatctgttagacgtgcagctttgagagctatcacagataag
gtaaaggaattgggtcccgaaattttatttaacttaatattacctctaatgatgcataac
acattggaggatcaggagagacatctcctcgtgaaagtaatcgatcgaattctgttcaag
ttggatgacttggtcagaccttatgtacacaaaattttggtggtcattgaaccgttacta
attgatgaggattactacgctagagtggaagggagagaaattatcagtaatctagccaaa
gctgcaggactagctaccatgattggaattatgagaccagacatagatcacccggatgaa
tacgtcaggaacactactgctagagcgtttgcagttgttgcgtctgcacttggtatacca
tcgttaattctgtttctcaaggcagtgtgtcaatcgaagaagaattgggaagctagacat
acagggattaaaattgtacaacagattgccattctgatgggttgcgctgttttgcctcac
ttaagacaactcgtttcgatcgttgctcatgggttgcatgacgagcaacagaaggtgaag
accatcacggcacttgccatagctgcgttagcagaagcagcagcaccgtatgggatcgaa
gcgtttgattctgttttgagacctctatggaaaggaatcacagaacacagagggaaagtg
ttagctgcatttttaaaggccatcgggttgatcatcccactgatggacccataccacgca
agttactacacgagagaagtgatggtgattctcattaatgagtttaactctcctgatgaa
gaaatgaaaaaagttgttctaaaatgtgtgaagcagtgtatacaaacagagggcatcgaa
aaggattacatcaatcaagaagtcgtgaacccattttttgacaaattttgggttctaaga
actagccatgataagagaaatctacatctaatagtagaaacgacagtagaaatttcaaac
aaaataggaggagcagctgtcattgggaggattgtagacgatttgaaggacccatctgag
cagttcagaaaaatggtcatgcagactatccaaagtattgttaataatcaaggggtagat
gacatagatcagacattagaggagcagctaatcgatggaatcctttacgcatttcaagaa
caagcctcagaggactattacgtgttgctaaactcattcgatgcgatagtaaataaattg
caaatcagaatgaagccctacttaccccaaatagcaggaattattcgatggagactgaat
acacctctgccaaaaattagacaacaaagtgcagagctgattggtaggatagctagcttg
atgcatctatgtgaggaacaccaaatgttgggtcatctagcgttatacctgtatgaatac
ctgggggaggaatacccagaagtgttaggtaacatcataggtgcgttaaaatccatcgta
gttgttttaggggtgcataatatgactccaccgataaaggatctgctaccgagaataacc
cccattttgaaaaatcgacatgagaaagtacaagaaaatgtgatcgatctgattggaatt
attgcagacaaaggaggagacttagtttctccaaaggagtgggatcgtatatgcttcgat
ctaattgagttgttaaaatcgaacaaaaaattaattaggagagcaacgatccaaacgttt
ggttatatagccaggactatcggaccatttgaggttctaaccgttttactcaataattta
cgagtccaggagaggcaactgagagtatgcaccaccgttgccatcgcgatagtagcagat
acgtgtctcccctactccgtccttgctgcactgatgaatgagtatcgaacccaggatctt
aatgtgcagaatggagtcttgaaagccttatccttcatgtttgaatacataggcgaaatt
gcaaaagactatgtatacgcagtggttcctctgcttgagcacgctctcatggatcgagat
ttagtgcataggcaaatagccacttgggcttgcaagcacttagcgctggggtgctttggg
ctgaacagagaagacgcgctgatccacttgctcaactatgtgtggccgaatatatttgag
acgtctcctcatctgatccaagctgtgattgattccatcgatgggttcagggtggcccta
ggtcccgccataattttccagtatctagtgcagggcatttttcacccctccaggaaggtg
cgcgaaatttattggaaaatctacaacaacgtttatatcggccaccaggacagcctcgtc
ccggtgtaccccccctttgagcgcctcgcggacagcaacttcgcgcgcgacgagctgcgc
tacacgttgaagcttccgcggtactggttgttcctattcttgacgagcggcgacaggcac
ttcttgggcgggtcgtatccttcgattttgagcggcgggatcttcacctgcggcgtggcg
gtgacaaagcggtaa

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