Plasmodium cynomolgi: PCYB_093490
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Entry
PCYB_093490 CDS
T02490
Name
(RefSeq) NOT family protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCYB_093490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcy03019
]
PCYB_093490
Messenger RNA biogenesis [BR:
pcy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PCYB_093490
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PCYB_093490
SSDB
Ortholog
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GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
14692918
NCBI-ProteinID:
XP_004222511
UniProt:
K6UTF9
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All DBs
Position
9:complement(<1090586..>1091728)
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AA seq
380 aa
AA seq
DB search
HPEEAKSCSEGTNSAAASADCTNGSRQSGWDYLSERRNNGHVEEKQLIEDETKTRQANRT
IGSKSMDPSKEQAPNVYICSTAPGGKDANVHPSNGANVHPSNGANVHPSNGANVHPSNGA
NVHPSNDANVHPSNDENIPLDELLYETTERAKNYNRTNYGLMGILKVIKMTDPQLNILAL
GTDLTTLGLNLNSPDFLFSSFTSPISDDPTYNEDYFVKPSCYLNTRFQIRLSLLLKLQTE
TLFYIFYNLPRDVLQAYAASELYLRKWTYHMNYKKWFFPRNLLNQGNLSSCRSWIYFDPV
TWTKKIYDNFLSVKDMMHVKDVTKCIEHIIQVQSNYSANLASPPNCGNPNQGAPPQGGSS
SQGASPPQGVSSPQGASPPQ
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
cacccagaagaagcaaaatcatgttctgagggtaccaacagtgcagcggctagtgcagac
tgcaccaatggatcgaggcagagcgggtgggattacctatccgaaaggcgcaataacggc
catgtggaggagaaacaactaattgaagatgagacgaagacgaggcaggcaaacagaacg
atcggtagcaaaagtatggacccttcaaaggaacaagcgccaaatgtttacatatgcagt
actgcacctggggggaaagacgcaaacgtgcacccctcaaatggcgcaaacgtgcacccc
tcaaatggcgcaaacgtgcacccctcaaatggcgcaaacgtgcatccctcaaatggcgca
aacgtgcatccctcaaatgacgcaaacgtgcacccctccaatgacgaaaacatcccattg
gacgaactactctacgaaaccacagagagagctaagaattacaatcgaacgaattatgga
ctcatgggtatactaaaggtgatcaagatgacggacccccaattgaatatcctggcctta
ggaaccgatctaactaccctagggttgaatttaaattcgccagactttctattttcctca
tttacttcccctataagtgatgacccaacatataacgaggattattttgtgaagcccagc
tgttatttaaacacccgttttcaaattcgcctatccctacttctgaaactccaaacagag
acgctgttttacattttttacaacctacctagggacgtactgcaggcttatgctgcctct
gaactctacctgagaaaatggacctatcacatgaactataaaaaatggtttttcccaagg
aacctactcaatcagggtaacttaagcagttgccgttcttggatttacttcgatccggtc
acatggacaaaaaaaatatatgacaattttttaagtgttaaggatatgatgcacgtgaag
gatgttaccaaatgtattgagcacatcattcaggtgcagtctaactatagtgccaatttg
gctagtcctcctaattgtgggaacccgaatcaaggcgctcccccccaagggggttcttcc
tcccagggggcttctcccccccaaggggtttcttccccacaaggggcttctcccccacaa
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