Plasmodium cynomolgi: PCYB_102000
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Entry
PCYB_102000 CDS
T02490
Name
(RefSeq) DEAD-box subfamily ATP-dependant helicase
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pcy
Plasmodium cynomolgi
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcy03041
]
PCYB_102000
03016 Transfer RNA biogenesis [BR:
pcy03016
]
PCYB_102000
Enzymes [BR:
pcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PCYB_102000
Spliceosome [BR:
pcy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
PCYB_102000
Transfer RNA biogenesis [BR:
pcy03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
PCYB_102000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
14693209
NCBI-ProteinID:
XP_004222797
UniProt:
K6UWQ7
LinkDB
All DBs
Position
10:complement(470731..473175)
Genome browser
AA seq
815 aa
AA seq
DB search
MSAFEELGLHGNLCELLEKNGIDLPTAIQQESIPLILGGGDVCASAETGTGKTLSFIVSS
LQIVHELFRNIGTYESSNSSVALCGSTKRDNDNGEIASEVKKGGLLLKVVSGNNSRVTLN
NALGECTCNGEYSSSFEEVKVGCEIRSGMYAYEIEVLGRCFLNVGFCPAVKETLKYNYTY
CSNGSKYTNGREENYGDAFSTIDIITCLINKNTNVIAFKKNGKFLGNAFKIFYKYNDLPF
FPYICGKYFHVKFHFANLKYADASYTELNEIMCSGQEDNSSTRKVYYGGDPGADKTASKF
ENKQMQSSGPPAGKGALASGKVDAANRTKLYCIVLCPTRDLAMQTYNNYLIYAESFSSSS
INIGLLVGGEQPNRDKRNQQQYSNILVCTCFKLMECIKKNTICLNDVRLLILDEADELIN
NDEKSILQIKDISMKHSQHVQTCFYSATLQDQNVKDCINKITNKPIFVDLKYGKNSIPSH
IYVCVYYVNNKNTNMCYSEQNRKEKMYDDIIYNEKLHAMSYEMVYEYTDKVHLLNCAKNE
KEKISLDIKINKLKKLIHIINVFNMQNGIIFCRTNLDCDNVYNFLNHLGDGKAYKGTIET
MKENKYSCVILKGKMSNMERKNNLDAFKKGEVRFLICTDVAARGIDIQNLRYLIIMTLSD
NINSFFHKIGRVGRDGKNSLCIVLSAESQEEKVWFHTCPSRGVNCYNRNLKDNKGCTVYI
KEADYIQTINNMLETPMHVLDSKYYYAENVVDPLNYLKNNPVSNKSRRNKSQSGNTIFSE
PLHTDVIGCFGSSIENIKKLQSDICCRYYESAKFA
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctttcgaagaactaggcctgcacggcaacttgtgcgaactgctagaaaaaaac
ggcatagatttaccaaccgctattcagcaggagtccatcccgctcattttagggggggga
gatgtatgcgcatcagctgaaacggggacaggaaaaacgttaagtttcattgtctcctct
ttgcaaatagtgcacgaattgtttaggaatataggaacgtacgaatcgagcaattctagc
gtagctctatgtggcagtaccaagagagacaacgataatggtgaaattgccagtgaagtg
aaaaaaggaggtctactcctaaaagttgtaagcggcaataattcgagagtcactctgaac
aatgcacttggagaatgcacatgcaatggtgagtactctagctcgttcgaagaagtcaaa
gtgggctgcgaaataaggagtggaatgtacgcctacgaaattgaagtgctaggaaggtgc
ttcctaaacgttggattttgtcccgcagtaaaggaaacgctaaaatataactacacctac
tgcagtaatgggagcaagtacacaaatggaagggaagaaaattatggggacgccttctca
accattgatataataacttgcttgataaataaaaacacgaacgtaattgcttttaaaaaa
aatgggaaatttttgggaaatgcttttaaaatattttacaagtataatgatctgcctttt
ttcccctatatatgtgggaaatactttcacgtgaagttccattttgcaaatttgaagtac
gcggatgcgtcctacacagagttgaatgaaattatgtgctcaggtcaggaagacaactcc
agcacgaggaaggtatactacggtggagatcccggggcggataaaaccgcgtcgaagttc
gagaacaagcagatgcagagcagtggaccccctgctggtaagggcgctttggcaagcggc
aaggtggacgcagcgaataggacgaagttgtactgcatcgttctctgccctactagagac
ctagccatgcagacgtacaacaattacctaatttatgcggagagtttcagcagctcgtcc
ataaacatcgggctgctagtaggaggggaacaacctaacagggacaaacgaaatcagcag
cagtatagcaacattcttgtgtgcacttgtttcaaacttatggaatgtataaagaaaaac
acaatatgtttgaacgatgtaagattgctaattttggacgaagcggacgaacttatcaat
aatgatgagaagtccattttgcaaattaaggacataagtatgaagcatagtcagcatgta
cagacatgcttctactcagccacgttacaagaccaaaatgtaaaggattgcattaacaaa
attacgaacaaacccattttcgtagatttgaagtatgggaagaatagcatcccctctcac
atatatgtttgcgtctactacgttaacaataaaaatacaaacatgtgctactcagaacaa
aacaggaaggaaaaaatgtatgatgacataatttacaacgaaaagctacacgcaatgagc
tacgaaatggtttatgaatatacagacaaagtacacttactcaattgcgcaaaaaatgaa
aaggaaaaaatttccctggatattaaaattaacaaattgaaaaaattaattcacataatt
aatgtttttaacatgcaaaatggaataattttctgtcgaacaaatttagactgcgataat
gtatacaattttttaaaccaccttggagatggaaaagcatacaaaggtacaatcgaaacg
atgaaggaaaataaatactcctgtgttattttgaaagggaaaatgtccaacatggaaagg
aagaataatcttgatgcttttaaaaaaggagaagtgcgctttttaatatgtacggatgtt
gctgccaggggtattgatattcagaatttaagatacttaatcattatgactctttctgat
aatataaattcattttttcacaaaattgggagagtaggaagagatggaaaaaacagctta
tgtattgttttaagtgcagaatctcaggaagagaaagtgtggtttcatacttgtcctagt
aggggcgttaactgctacaacagaaatttgaaagacaacaaaggatgcacagtatacatt
aaagaagctgactatattcagaccatcaacaacatgctggaaacgcccatgcatgtactt
gattctaagtactactatgcagagaatgtggtggacccccttaactacctcaaaaataac
cccgtttcgaacaaaagtcggagaaacaaaagtcagagcggcaacaccattttctcggag
cctcttcacaccgacgtgatagggtgcttcggctcaagtattgaaaatatcaaaaagttg
cagagtgacatctgttgcaggtactacgagtcggccaagtttgct
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