Plasmodium cynomolgi: PCYB_102150
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Entry
PCYB_102150 CDS
T02490
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03018
RNA degradation
pcy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PCYB_102150
09123 Folding, sorting and degradation
03018 RNA degradation
PCYB_102150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcy03019
]
PCYB_102150
03041 Spliceosome [BR:
pcy03041
]
PCYB_102150
Messenger RNA biogenesis [BR:
pcy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PCYB_102150
mRNA degradation factors
5'-3' decay
Lsm complex
PCYB_102150
Spliceosome [BR:
pcy03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PCYB_102150
Complex C
U2 snRNP components
PCYB_102150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Hfq
Motif
Other DBs
NCBI-GeneID:
14693224
NCBI-ProteinID:
XP_004222812
UniProt:
K6UWS0
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All DBs
Position
10:complement(520784..521346)
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AA seq
95 aa
AA seq
DB search
MRPQKNHHVTVELKNDLQISGVLHSVDQYLNIKLTNVTVNHPEKYPHLLSIKSCFVRGSV
VRYVFLPSKEIDVEKLHHMCRKEAKMTSEKEKERK
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccacagaaaaaccaccacgtgacggtcgaattgaaaaatgacttgcaaatatct
ggggtgctgcactcggtagaccaatacctgaatatcaaattgaccaatgtaactgtgaac
cacccggagaagtatcctcacttgctgtcgatcaagtcctgcttcgtgcggggttctgtc
gtgaggtacgttttcctgccgtccaaagaaatcgacgtggagaagttacaccacatgtgc
aggaaggaagccaaaatgacttcggaaaaggagaaggagagaaagtga
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