Plasmodium cynomolgi: PCYB_103400
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Entry
PCYB_103400 CDS
T02490
Name
(RefSeq) cell differentiation protein rcd1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCYB_103400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcy03019
]
PCYB_103400
Messenger RNA biogenesis [BR:
pcy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PCYB_103400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
14693350
NCBI-ProteinID:
XP_004222937
UniProt:
K6UX44
LinkDB
All DBs
Position
10:complement(1088003..1090552)
Genome browser
AA seq
719 aa
AA seq
DB search
MVSNDGFASGYKVNNASNVNAGVGNAGSSGNTAGSASGVNSAAGLGSRGGAYRHSTNESS
ASRGAAGRNAAARGNPSQANPNQGGPNQGGPSQGGPNQGSPNQSGPNQSGPNQGGPNMST
PSQGGPPHNVAVGAPLNSVGQGIAQGSAAAVGGGGHASPQHQGASSSHNTVPPTSNTRNV
KNGNAANGISSASSGIGPYIQQSERMPNEANNGNGSGNTESKNRPFEYLRLTSLGVIGAL
VKVDNPDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILIDELGLNYICATPVRF
YAVSTVLSNMINALIENPSSRLLKHIVRCYLRLSENPKALKALRECLPESLRHVHKAFIP
CLKEDPYTKKWLLQLLYNINSEDVMHGPGGTHVGTHAGGHGGSHAGSHAGVHGGSHIGSH
VGSHVASHAASHAGVHAGSHAAGQVGTQGGGALGMHTREHAGAHATGHVGGYAAATHSGG
HGGVSGGHPGGRQGLHGAGGSKSTYAGVSIPASMSEGSSTGGVSGGHGNSGHVGGAHPSG
GLVSSSSSRSNSFKDKVHMGSASNPNVSSKAGTAKGMASATTAPSNAAACALSNATPSGN
AMNSAANSANGANGANGANSANSANNANNANGAAGANSANNANGAAGATNNTSSGNVTNA
PGAHEGSSGGGANGAGKAGINGKTGSNGKSGSSSKAGSNGGSANNNNNNGSNAASGPSH
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggtaagcaatgacggttttgccagtggatacaaggtgaataacgcgagcaacgtgaat
gccggtgttgggaacgcggggtcgagtggcaacactgcaggaagcgcgagcggcgtcaac
agtgccgctggcctgggctcgaggggtggcgcgtaccgccacagcacaaatgagagcagc
gccagtagaggtgctgcggggaggaacgccgccgcgaggggcaaccccagtcaagcgaac
cccaatcagggcggccccaatcagggcggtcccagtcagggcggtcccaatcagggcagt
cccaatcagagcggccccaatcagagcggccccaatcagggcggtcccaacatgagtact
ccaagccaaggtggaccaccacacaacgtcgcagtaggagctcccctgaacagcgtgggg
cagggaattgcacaaggcagtgctgccgctgtaggaggagggggacacgcctccccccaa
catcagggagcatcgtccagccacaacaccgttcctcccacatcaaacactcgcaacgtg
aagaacggcaatgccgcgaatggtatcagcagtgcatcaagcggtatcggtccctacatt
caacaaagtgaacgcatgccgaacgaagccaacaacgggaatggtagcggaaacactgaa
tctaaaaatagaccgtttgaatatctacgtctaacttctctaggtgttattggtgcatta
gttaaggtcgacaaccccgacgtaattaattttttattgcagaccgagatcatcccactt
tgcttacgtattatggagacggggagtgaactgtccaaaacagtggcgacctttattgtc
caaaaaatcctaatcgacgaattgggactcaactacatatgtgccactcctgtcagattc
tatgccgtgtcgactgtcctttcaaatatgattaatgcactgatagagaatccctcctcg
aggttgttaaagcacattgtgaggtgttacttaagactgtcagaaaaccctaaagccttg
aaggcacttagggagtgcctccccgagtcactgagacatgtgcacaaggctttcattcca
tgcctcaaggaggacccctacaccaagaagtggctgctgcaactactgtacaatattaac
agcgaggatgtcatgcacggccccgggggaacccacgtcggtacgcacgccggtggtcac
ggcggtagtcacgctggcagtcacgctggggtgcacggcggaagtcacatcggcagtcac
gtcggcagccatgtcgctagtcacgccgctagtcacgccggggtgcacgctggatcacat
gcagctgggcaggtggggacacaaggggggggggcccttggtatgcatacgagggaacac
gccggtgcgcatgccactggccacgtcggaggatatgccgccgctacccactcaggagga
catggcggagtgagtgggggacaccctggggggagacagggtctgcacggtgccggcggt
tccaagagcacctatgcgggggtcagcattccggcgagcatgagtgagggttcctccacg
ggaggggtcagcggcggacacggtaatagtggtcatgttggtggggcgcatcccagtgga
ggcctcgtctcctcctcctccagcagaagtaactcctttaaggacaaagtgcacatggga
agtgcgagtaacccgaacgttagcagcaaggctggcacggctaaggggatggcaagcgcg
accactgcaccgagtaatgcggcagcgtgtgcactgagtaatgctaccccgagtggcaat
gccatgaacagcgccgcaaatagcgcaaatggagcaaatggcgcaaatggcgcgaatagc
gcgaatagcgcgaataacgcgaataacgcgaatggtgcagccggcgcgaatagcgcgaat
aacgcgaatggtgcagccggcgcgacgaacaacaccagcagcggcaacgtgacaaacgcc
cccggcgcacacgagggaagtagcggtggaggtgcgaacggcgcaggaaaggctggcatt
aatggaaagacgggcagcaatggaaagtcaggcagcagctcaaaggcaggtagcaatgga
ggcagtgccaacaacaacaacaacaacggaagcaacgcagccagtggacccagtcattaa
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