Plasmodium cynomolgi: PCYB_112710
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Entry
PCYB_112710 CDS
T02490
Name
(RefSeq) DEAD/DEAH box ATP-dependent RNA helicase
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
pcy
Plasmodium cynomolgi
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcy03041
]
PCYB_112710
03009 Ribosome biogenesis [BR:
pcy03009
]
PCYB_112710
Enzymes [BR:
pcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PCYB_112710
Spliceosome [BR:
pcy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
PCYB_112710
Ribosome biogenesis [BR:
pcy03009
]
Eukaryotic type
90S particles
Helicases
PCYB_112710
Pre-60S particles
PCYB_112710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
14693616
NCBI-ProteinID:
XP_004223197
UniProt:
K6UXL5
LinkDB
All DBs
Position
11:<759816..>761392
Genome browser
AA seq
413 aa
AA seq
DB search
ILGAAKTGSGKTLAFLVPSINILYNIKFLPKNGTGVLIISPTRELCLQIYQVCKDLCKYI
PQTNGIIIGGMSRNEEKKFIHGINILIATPGRLLDHMQNTKEFIYKNLISLIIDEADRLL
QIGFEEEINLIVKRLPKKRQTALFSATQTTKVENLIRLSLQKPIFIEVTTKIATVERLQQ
GYALVDEDKRFLLLFTFLKRNISKKIMVFFNNCMSVQFYNDLLNYIDIPTFCIHGKKKQN
KRLKSFSEFSAAQSAILLCTNVAARGLDIPNVNYIIQYDPPDDSKEYIHRVGRTCRGKDS
SGSAIIFLMKHELKFLNYLKFYNIPINQFAYDPSKLINVQSHIESIVTKNFHLHKMAREA
FKSYLNGYITYALKDVFDVNNLNLLQTSKNFGLEAPPKVDLNLKLNVKKRKFK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
attcttggagcagccaaaacagggtcaggaaaaacgttagcatttctagtaccctccata
aatattttatataatataaaattcttgccgaaaaacggaacgggagttttaataatatcg
cccaccagagaattgtgtcttcaaatttatcaagtatgtaaagatctgtgtaaatatatt
ccccagacgaatggaataatcattggtgggatgagtcgaaatgaagaaaaaaaatttatt
catggcataaacatactaattgcaacacctggtagactgctagaccatatgcaaaacacg
aaagaatttatttacaaaaatttgatctcgcttattatagacgaagctgacaggttactt
caaattggttttgaggaggaaattaatttaattgtgaaaaggttacccaagaaaagacaa
actgccctattttcagctacacaaacaaccaaagttgaaaatctaataaggctttctctg
cagaagcctatttttatagaagtaacgacgaaaattgccacagtggaaaggctgcaacag
ggatatgccttagttgatgaagataaaagatttctgctactatttacatttttaaaaaga
aatatttcgaaaaaaattatggtcttttttaacaattgcatgtccgttcagttttacaac
gatttgttaaattatattgacattcccaccttttgtattcatggaaaaaaaaaacaaaat
aaacgacttaaaagtttcagcgagttttccgctgcccaaagtgctattctgctttgtaca
aatgtggcagctagagggctggacatcccaaatgttaattacattattcagtatgacccc
ccagatgactccaaggaatatatccatcgagtaggaagaacttgcagaggaaaagattca
agtggctcagctatcatatttttgatgaagcacgaattaaaatttttaaactatttaaag
ttttataacatcccaattaatcagtttgcctatgacccaagcaaattaataaatgtccag
tcacacatagagtccatcgttactaaaaatttccacttgcacaagatggctcgggaggct
ttcaaatcgtatttgaatgggtacattacctacgcactgaaggacgtctttgacgtgaac
aacctgaatttgctacagacttcgaagaacttcgggctggaggccccaccgaaagttgat
ttaaatttaaaactaaatgttaaaaagaggaagtttaag
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