KEGG   Plasmodium cynomolgi: PCYB_114140
Entry
PCYB_114140       CDS       T02490                                 
Name
(RefSeq) RNA binding protein
  KO
K12881  THO complex subunit 4
Organism
pcy  Plasmodium cynomolgi
Pathway
pcy03013  Nucleocytoplasmic transport
pcy03015  mRNA surveillance pathway
pcy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PCYB_114140
  09122 Translation
   03013 Nucleocytoplasmic transport
    PCYB_114140
   03015 mRNA surveillance pathway
    PCYB_114140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcy03019]
    PCYB_114140
   03041 Spliceosome [BR:pcy03041]
    PCYB_114140
Messenger RNA biogenesis [BR:pcy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     PCYB_114140
    TREX complex
     PCYB_114140
Spliceosome [BR:pcy03041]
 Complex C
  Other components
   EJC/TREX
    PCYB_114140
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    PCYB_114140
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 14693763
NCBI-ProteinID: XP_004223341
UniProt: K6UV59
LinkDB
Position
11:complement(1416662..1417971)
AA seq 137 aa
MREFRKYNNSGHHHRKHYHRQYGGYNNSHNEEYKTNPHHNRINKYNNRNSYQNHDERDSQ
VRVKISNLDYTISKNDLVVPSALASALAIAMTELFSNVCKVVNAWINYDHTDRSDGTGVC
VFENINDAQKAIDKYDG
NT seq 414 nt   +upstreamnt  +downstreamnt
atgagggaatttaggaaatacaataatagcggtcatcatcaccgaaaacactaccatagg
cagtacggcggttataacaactcccacaacgaagaatacaagacgaacccccaccacaac
agaataaacaaatacaacaataggaactcctaccagaaccacgacgagcgggacagccaa
gtgcgtgtgaaaatctcaaacttggactacaccatctcgaagaacgatttagtggtaccg
tcagccctggcgtcggcattggccatagcgatgaccgaactcttcagcaacgtgtgcaaa
gtcgtgaatgcctggataaactacgatcacacggatagatcggatggcacaggcgtgtgc
gttttcgaaaacatcaacgacgcgcagaaggccatagacaaatacgacggttag

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