Plasmodium cynomolgi: PCYB_124230
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Entry
PCYB_124230 CDS
T02490
Name
(RefSeq) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PCYB_124230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcy03021
]
PCYB_124230
03400 DNA repair and recombination proteins [BR:
pcy03400
]
PCYB_124230
Enzymes [BR:
pcy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PCYB_124230
Transcription machinery [BR:
pcy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PCYB_124230
DNA repair and recombination proteins [BR:
pcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PCYB_124230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
DUF6575
Motif
Other DBs
NCBI-GeneID:
14694230
NCBI-ProteinID:
XP_004223804
UniProt:
K6VF03
LinkDB
All DBs
Position
12:complement(1398564..1401090)
Genome browser
AA seq
834 aa
AA seq
DB search
MMRLIGLPTWAPLLIITCKALQIRNNCFIPSYQNVHPIGSSGEEKLCTRSCKRSRHPSRS
RGEQNKWIVFSKDDEIKESRRPEEQSDDYKMTRRKNFIKKYQVKKEEVEAYIEQMKKNST
SGYEPQFPKDAFRTPDGLTNVILDYKYKNDNLKIHNYYSFFLSKRKKKKQPNGQSGPNGQ
NEPNEPKGEKDHPDRDPLISVQEFLFLKKKGFFEGDLYTWKNWVLLNRGEWEDCIGYGEG
DKEKEYQIETLRKMVEPKMKRMPIEYWGSFRAIDFNVNHYPIYKKLFDFFDKISVSGNEP
NEKFYPFLFYPRFSVRRDRSGLGYGDAQFFGNYGDIYKKREERLRRLREGSGVNGSGVGG
DGDVGHVGGVGGVGGAGEGDVDPPGIDAHMSGKSERVVHSSLHRESFIDKYDFGPNDIKV
EEATDIIKYPQNGRLYQKFYIGPLNITDGHTFGTLLKYVCQTQIYGYAIVAIKIHNMNPD
TRIDNVQEDLLEIALNLSDVCIYSKEINIETNVRLIFKGPLMLVAGMIPLPSHLQVVNKE
QYICTLKEDGLLDISIKIEYGKGHWLTYEKGLYKRELGSDNECMKKRQVKEVIEKEYMPI
SASFGSCRMVRMAVHKIATKYWCEDRCEFTDPKQMLVMEIWTDCRMLPKNVLLYGIKNIK
KILRRFREMIISDTDFPSDVEDEEMKKLWPAIDRYKFLQTKQKMEGGPPIHDVDAESDSG
GSIGSIGSSGNSGAGDGSGERHSQMGSQNLLDSFSQKLVDPDNFPKHSNIILPLEDTPPP
YLDTLEWLKMEVKKDRIRKKRKGSEKKTSKAPNRRTFDYDDYLDDRLGDLLDEG
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggctgatcggccttcctacatgggcccccctcctcatcataacctgcaaagct
ttgcaaattcggaacaactgcttcatccctagttaccaaaatgtgcaccccattgggagc
agcggcgaggaaaaactttgcacacgaagttgcaagagaagtcgccaccccagcaggagc
agaggggaacagaacaaatggatcgtgttcagcaaagatgacgagataaaggaaagcagg
agaccagaagaacagagcgatgattataaaatgacgagaaggaaaaatttcataaaaaaa
taccaagtgaaaaaggaagaagtagaggcatacatagaacaaatgaagaaaaactcaact
agtggatatgaacctcaatttccgaaggacgcttttaggaccccagacggattaacaaat
gtcattttggattataaatacaagaatgataatttaaagattcacaattattactccttt
tttctgagcaagcggaaaaaaaaaaaacagccaaatgggcaaagtgggccaaatggacaa
aatgaaccaaatgagccgaaaggcgaaaaagaccacccggacagagacccactaattagc
gtacaagaatttcttttcctaaaaaagaagggattctttgaaggagatttgtacacgtgg
aaaaattgggttcttctgaatcggggagagtgggaagattgcattggatacggagaagga
gataaagaaaaagaataccaaatagagacgcttcgaaaaatggtggaacccaagatgaag
agaatgcccatagaatactggggtagctttagggcaatcgactttaatgtgaatcattac
ccgatttacaaaaagctgtttgacttctttgacaagatcagtgtgagtggcaacgagccg
aacgagaagttttaccccttcctcttctacccccggtttagcgtgcgcagggataggtcg
gggctgggttacggggacgcgcagtttttcggcaactacggggacatctacaagaagcgc
gaggagcgcctgcgcaggttgcgcgaggggagcggtgtgaatggcagcggtgttggcggt
gatggcgacgttggccatgttggcggcgttggcggagttggcggagctggcgaaggggac
gtggacccccccgggatcgatgcgcacatgtcgggcaagagcgaaagagtggtgcactcc
agcctgcaccgggagagtttcatagacaaatacgacttcgggccaaacgacatcaaagtg
gaggaagcgacggacataatcaaatacccacagaacggcaggctctaccaaaagttctac
atagggcccctaaacataaccgatgggcacaccttcggcactctgttgaagtacgtctgt
caaactcagatctatgggtacgccatagtggcgattaaaattcacaatatgaatccagac
accagaattgataacgtgcaggaggacctcctagaaatagcactcaatttatcagacgtc
tgtatatacagtaaagaaataaatatagagaccaacgtacgacttatttttaaaggaccc
ttgatgctagtagcagggatgatacccctaccgtcccacttacaagtagttaacaaggag
cagtacatatgcacacttaaagaagacggtcttctggacatttcgataaaaattgagtat
ggaaaaggtcattggctaacatacgagaagggattatataaaagggaactaggttctgac
aacgaatgcatgaaaaaaagacaagtaaaggaagttattgagaaagagtatatgcctata
agtgctagctttggtagctgccgcatggtacgtatggctgtacataaaatcgccactaag
tattggtgtgaagataggtgtgagtttaccgacccgaaacaaatgcttgttatggaaata
tggactgattgtaggatgctgccgaagaatgtgttgctgtatggaattaaaaatataaaa
aagattttgagaagattcagggagatgataatttccgacacagacttcccgtccgatgtg
gaggacgaggagatgaagaagctgtggcctgccattgaccggtacaaatttttgcagacc
aagcagaagatggagggaggcccgcccatccacgacgtggacgcggagagtgatagcggc
ggcagcatcggcagcatcggcagtagcggtaatagcggcgcgggtgacgggagtggtgag
cggcacagccaaatgggtagccaaaacctgctggactcattttcgcaaaagctcgtggac
ccggacaacttccccaagcactcaaatatcatcctgccactggaggacacgccaccaccc
tacctggataccctggagtggctaaaaatggaggtaaagaaagacagaattcgcaagaag
aggaagggttccgagaaaaaaacttccaaagcgcccaacaggcgcaccttcgattatgac
gactacctggatgacaggttgggcgacctactggacgagggctga
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