KEGG   Plasmodium cynomolgi: PCYB_124620
Entry
PCYB_124620       CDS       T02490                                 
Name
(RefSeq) U2 snRNP auxiliary factor
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
pcy  Plasmodium cynomolgi
Pathway
pcy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PCYB_124620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcy03041]
    PCYB_124620
Spliceosome [BR:pcy03041]
 Complex A
  U2 snRNP components
   U2 related factors
    PCYB_124620
 Complex B
    PCYB_124620
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 14694269
NCBI-ProteinID: XP_004223843
UniProt: K6UE82
LinkDB
Position
12:1541628..1544372
AA seq 894 aa
MWRKAVGSYFGGKGDAKEDEDAAAAEGKPNDEAADANPREEQKEVKEEPNLEEVPKPSTT
RRGRPSTKKGTKGKDSKGEKGASENKEAPDQKSKDGSGGSGDSGGTGNVGGSEANQGDAN
DGSALKEGSGDAGENADETKSVKKKKNKEEEDPQSQQSQQSQELQKESPHEAEGDANEAR
SKRRSESREKKSEPAEKESSAGNNPSDEKKAREKSREKASSDLQEKMKIIKEKLKSSERS
QGASMEELQNKEEGRSREKGRSREDGRSKEEGRSREEGRSREEGRSREEGRSKRKHKDVP
SSSDEAHSSKRKRRSGERGMEERGENVSRHRHRSRERERSEEGDRDRDRDREGDRSLERI
RSKDLARSRGRHRSRSRHRSRSRHRSRSRGRHRSRSRSRGRHRSRHRSRRGRDRSKRLSN
SDSDSSSDERHHRHHHKSRRRRKRSSRNSSDREHSSGSTGNRNGYDRKDRSSSSERRSKE
GRKKKKTKWDTVDENLLKNNLLDNSANGLLQQQNLALANGLGANNKVTPLGRNPYEVEGD
KKQRKLYIGSIIKDSSLEIKIGDIVLMPILKCEIFNVESRFCFLEFRSLEITWLCLRLDA
ISFNNYCLRIARPHDFVPPPGGDPALTVVFTDINHEVFEMVKPVKIAPVRSTGDDDNKLY
IQNLPHDLRDDQIRDLLQQFGKLKGFNVIKDLNTGLNKGYGFFEYEDSNCTPIAMHALNG
FVCGQNILNVKKATFGKSQNSTQNANTTSLATGSVDLPVSLLPNSISQKILSNSIIGLQI
QASRKIGEKSSRVVQLTNAVFQEDLLIDSQYEEILKDIKEEAEKYGPLQNIVIPKPNKDL
SYTEGVGKIFLHYADETTARKAQYMLNGRLFEKRVVCAAFYSEEKFLAGKYVLS
NT seq 2685 nt   +upstreamnt  +downstreamnt
atgtggaggaaagcagtcggaagctacttcggcggtaagggcgacgccaaggaagacgag
gacgcagctgcggctgaaggcaaaccaaatgatgaggcagcagatgcaaaccccagggaa
gaacagaaggaagtcaaagaggaaccgaatttggaggaggttcccaagccgagtacaact
cgaaggggaaggccttccacaaagaaaggaaccaaggggaaggatagcaagggagaaaaa
ggggcatcggaaaataaggaggcacctgatcaaaaaagcaaagatggtagcggtggcagc
ggtgacagcggtggcaccggtaatgttggcggaagtgaagcaaaccagggcgacgccaac
gatggcagcgccctaaaggaagggagcggggacgcaggcgagaacgcggatgagaccaaa
agtgtgaaaaagaaaaaaaacaaagaggaggaggacccacaatcacagcaatcgcaacag
tcgcaagaactgcaaaaggaatcgccgcatgaagcggaaggggacgctaacgaggcacgt
agcaaaagacgcagcgaatcgcgcgaaaaaaaaagcgagcctgcggaaaaggaaagctca
gctggaaacaatccgtcagacgaaaaaaaggcaagagagaaaagtcgcgaaaaggcaagc
agcgacctgcaggaaaagatgaaaataattaaggagaagctcaagtcgagcgagcgcagt
cagggggcaagcatggaagagctccagaacaaagaggagggacgaagtagagaaaaggga
cgaagcagggaagatgggcgaagtaaagaagagggacgaagcagggaagaggggcgaagt
agagaagaggggcgaagcagggaagagggacgcagcaaaagaaagcacaaggatgtgcca
tcaagcagcgatgaagcccactcctctaaaaggaagaggcgaagcggagaaaggggcatg
gaagagagaggcgaaaatgtaagtaggcaccgacataggagtagagaaagagagaggagc
gaagaaggagatagagacagagacagagacagagagggggacagaagcttagaaagaatt
cgaagcaaggatctggccaggagcagaggcaggcaccgaagcagaagtagacatcgcagc
agaagcagacacaggagccgaagcagaggaagacaccgcagtagaagcagaagcagaggc
aggcatagaagcagacatagaagcagacgaggaagagataggagcaaaaggttaagtaac
agtgatagcgacagcagcagtgatgagagacatcaccgacaccaccacaagtccagaaga
agaagaaaaagaagttccagaaatagtagtgatagagaacactccagtggaagcacagga
aacagaaatggatatgacaggaaagacagatcatcttctagcgaaagaagaagtaaagaa
ggcagaaaaaaaaaaaagacaaaatgggacactgtagatgaaaatttattgaaaaacaat
ttgctagataacagtgccaatggattactgcaacagcagaatttagcactagctaatggt
ttgggggcaaataacaaagtgaccccattaggtagaaacccttacgaagtggaaggagat
aaaaagcaaagaaaattatacattggatcaattataaaagattctagtttggaaataaaa
ataggagacattgtattgatgccaatattgaagtgtgaaatattcaacgttgaatctaga
ttttgttttctagaatttagaagccttgaaattacatggctttgtctaaggctagatgct
atttcgtttaataattattgcttacggatagctagaccacatgatttcgttcctccccca
ggaggggacccagcactgactgtcgtattcacagatatcaatcacgaagtattcgaaatg
gtgaaaccggtaaaaatcgctccagtaagaagcacaggagatgatgacaacaaattatat
atacagaatttgccccacgatttgagagatgatcagataagagacctgctacagcagttt
gggaaactaaaaggatttaacgttataaaagatttaaatactggattgaataaaggctat
ggtttctttgaatatgaagatagtaactgcacacctattgccatgcacgctttgaatggc
tttgtgtgtggacagaacatacttaacgtaaaaaaagctacattcggaaaaagccaaaat
agtacgcaaaatgcaaacacgacaagtttagcaactggcagtgtcgatttgccagtgtca
cttttgccaaattccatttcgcaaaaaattctgagtaattccatcataggtttgcaaatt
caggcgtccagaaaaattggcgaaaaatcttctcgagtggttcaactcaccaatgctgtt
tttcaggaggatttacttatcgatagtcagtatgaggaaatattaaaggatattaaggaa
gaagctgaaaaatatgggccccttcaaaacattgtaattccaaaaccaaataaggatttg
tcctacacggaaggcgttggcaaaatttttcttcattacgcagatgaaactacggccagg
aaggcacagtacatgttaaatgggagactgttcgagaagagagtagtatgcgctgcgttc
tactcggaggagaagttcctggcggggaaatacgtcctctcatag

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