Plasmodium cynomolgi: PCYB_125610
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Entry
PCYB_125610 CDS
T02490
Name
(RefSeq) DEAD-box RNA helicase
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03013
Nucleocytoplasmic transport
pcy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PCYB_125610
03015 mRNA surveillance pathway
PCYB_125610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcy03019
]
PCYB_125610
Enzymes [BR:
pcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PCYB_125610
Messenger RNA biogenesis [BR:
pcy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PCYB_125610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
14694368
NCBI-ProteinID:
XP_004223942
UniProt:
K6UZC4
LinkDB
All DBs
Position
12:complement(2003117..2005513)
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AA seq
622 aa
AA seq
DB search
MSIQEETPSAEKTNDEKTNDNSKNEGLKVSTADQEQKKEDTKVESKDDVKSEGKDDVKSE
GKDDVKSEGKDDRKSDGKDDAKAAAGGEDVMNMLLSYLQKNKDDPKIMQTMLSMMSGKGK
EGAGGLSQVKLPSSKANETEAGDDKGSSTNGNKKDEGAAQRDGENKTKEEKETGNKLLNL
FSTKTDRSIFPSFNFSGGLNNTGNSTKEGSSAAGSIFGDGKKSFFAEFGEDKGRNGSGSM
NKFGFSGFGGFGSSFGSGKKNEDGALAKGETTQEIFSKGTSTTDVSASNEKEEDTEKKGD
TVMKKKFETLVDDDDDYIIENAETKEPVEEEAISMIENMNIMNDDNGKERKLSNFDFSKA
LNNDNNEEVRDIKLYRSRNTWEELNIDNDLIQILTYLKFFAPSKIQGLALPYILNSNKNL
IAQAQNGSGKTLTFVISMLSKINRNEGSLQAMCICPTRELAQQNYEVVGKFTKYLTVKVF
LAVPLCDRYNKNAGFQIYVGTPGKTLDLLKRKFVDTKNVSIFVLDEADDLIDIKNNMSSQ
VETIKRFLPKRCQILLFSATYNEDVRSFADKFAPGASKISVRQEDLTLKCVKQYYLLTEN
DEQKYYYLSELYCSMSISHEVK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgagcatacaggaggaaacccccagtgcggaaaaaaccaacgatgaaaaaacgaatgac
aactcgaagaacgaggggttgaaggtttccaccgccgatcaggaacaaaagaaagaagac
acaaaggtggaaagtaaagatgatgtgaaaagcgaaggtaaagacgacgtgaaaagtgaa
ggcaaagacgatgtgaaaagcgaaggcaaggacgatcggaaaagcgacggtaaggacgac
gcgaaggctgcagcaggtggggaggacgtcatgaatatgctgctgagctacctgcagaag
aataaggacgaccccaaaatcatgcaaaccatgctgagcatgatgagtgggaagggaaaa
gaaggtgcagggggactcagtcaggtgaagttacccagcagcaaggccaacgaaacagag
gcaggggacgacaaaggaagttcaactaatggaaacaagaaagatgaaggggcagcgcaa
agagatggtgagaataaaacgaaggaagagaaagagacaggaaacaaactgctaaatctg
tttagtacgaaaactgatagaagcatttttcccagttttaatttttccggtggattaaac
aacacaggaaatagcacaaaggagggatcttcagctgcaggtagcatttttggagatgga
aaaaaaagtttctttgctgagtttggcgaagataaagggcgcaatggtagtggcagtatg
aacaagttcggctttagcggattcggtgggtttggtagtagctttggcagtgggaagaag
aacgaagatggggcccttgcgaagggggaaacaacacaagagatcttcagcaagggaaca
agcacaacagatgttagtgcaagcaatgagaaggaggaagacactgaaaaaaaaggcgat
actgtgatgaagaaaaaattcgaaactttagttgatgacgacgatgattatataatagaa
aacgcagaaacgaaggaaccagtcgaagaagaagccatctcaatgatagaaaatatgaac
ataatgaatgatgacaatggaaaagaaagaaaattaagtaacttcgatttcagcaaagca
ttaaataatgataataatgaagaagtgagagacatcaaattatatcgttcgagaaataca
tgggaagaattaaacatagataatgaccttatacaaatcctgacgtatttaaaatttttc
gccccttccaaaatacaaggcctagctcttccctacattttaaacagtaacaagaattta
atagcccaagctcaaaatgggtcaggaaaaacactaacctttgtcatttctatgctatcg
aaaattaatcgaaatgaaggatcattgcaagccatgtgtatctgtccaacaagggaatta
gctcaacagaattacgaagtagtgggaaaattcaccaaatatttaactgtcaaagttttc
ctagctgtaccactctgtgatagatataataaaaacgcggggtttcaaatatacgtaggt
actccaggaaaaacattagacttattaaaaagaaaatttgtggatacaaaaaatgtatca
atttttgtacttgacgaagctgatgatttaattgatattaaaaataacatgtcctcccaa
gtagaaactatcaaaagatttttaccaaaacgttgccaaattcttctcttctctgctact
tataatgaagacgtacgatcctttgctgataaatttgctccaggtgcatctaaaataagt
gtccgtcaggaagacctaactttgaaatgtgtaaagcagtattatctcttaacagaaaat
gacgaacaaaaatattactacctttctgaattgtattgctctatgagcatttcgcatgaa
gtgaagtga
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