Plasmodium cynomolgi: PCYB_141710
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Entry
PCYB_141710 CDS
T02490
Name
(RefSeq) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PCYB_141710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcy03021
]
PCYB_141710
03400 DNA repair and recombination proteins [BR:
pcy03400
]
PCYB_141710
Enzymes [BR:
pcy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PCYB_141710
Transcription machinery [BR:
pcy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PCYB_141710
DNA repair and recombination proteins [BR:
pcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PCYB_141710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
14695121
NCBI-ProteinID:
XP_004224690
UniProt:
K6UMM8
LinkDB
All DBs
Position
14:complement(343414..345621)
Genome browser
AA seq
681 aa
AA seq
DB search
MMLFLLLVLAFATANESHLGLILKSKNPAFLPVHTGYSKHSNTRGRSRHLGRYYTKEESG
NRKFRNRDIFKFGSFEDDQISDEDDSNEYEEFDDEDYDNVHDDRLGDDHAINEESKEDPE
LVRFDILREEGKERTEEGAQLNGENNPNANGEREDELKDELKDELKDELKEGDNLEGEDS
LWMKSRRQVAGKHRYNVYKDEVTKKDDNEIDLQKADKIDRKEGKLPPYIYEGGKAYEGKA
EDYEPEVYDFHTYNKYFDELCKEKKSAIDSYQLNKSQLDESYFDAKKGGPKTFGFKFKQI
QPVKYHQGRAYTYFFMHSHEVELSPIFLNAFRRVAIKHLKGGRVTALRIPNMKHEFYCIV
GVRENFFDLAQNLRHITFKNVPEHADMDNYITGKFRIKGPMIVVAGHMQLPKGIEIVNKN
QYICSVSAGSYLEMDVKIESIEEYVMPEYGSQSRNRDICKDNFIHFSSSCTPVEYFGFMG
QRRGINLDTLGEINIVEMHTDGSITPKSALLKTIDYISENFQYMENALYNNCHTCDDGSV
QEEFRNPEFYMDKDRYTDVPWNKYKTTAEELEDTKKWLYRKDVHRQYDIDPESAQSKQER
EILWEKKKKFLKEIDKRREQIKKGPSVSEGEYIPSEERHDCLLDWPVDKSERNMNPPRWV
IERPLDRNPHIGHEEIYDEGI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgatgctatttctactgctagtcctggccttcgctactgctaatgaatcgcatttaggc
ttaatattgaaaagtaaaaacccggcgtttttgcctgtacacacgggatactctaagcac
agcaacacgagaggaagaagcaggcaccttggacgatattacacaaaagaggagtcagga
aataggaaatttcgcaatagggatattttcaagttcggctcatttgaggatgatcagata
agcgatgaagacgattcgaatgagtacgaagaatttgatgatgaagattacgacaatgtg
cacgacgatcggttaggtgatgaccatgcaataaatgaggagtcaaaggaggatccagaa
cttgttcgcttcgacattttgcgtgaagaagggaaggaaaggacggaggagggggcgcaa
ctgaatggggaaaataacccgaatgcaaatggagagagggaagacgaattgaaagacgaa
ttgaaagacgagttgaaagacgagttgaaagaaggagacaatttagagggagaggactcc
ctgtggatgaagtccaggagacaagttgcgggaaaacatagatataatgtgtacaaggac
gaagtaacaaaaaaagatgataatgaaatagatctacaaaaggcggataaaatagatcgg
aaagaggggaagttgccgccatacatatacgaaggaggaaaggcatacgaaggaaaagca
gaggattatgaaccagaagtatacgattttcatacgtataataaatatttcgacgaatta
tgtaaggagaaaaagtcagcaatagattcgtatcagttgaacaaaagtcagctggatgaa
tcatattttgatgccaaaaaagggggaccgaaaacatttggtttcaaatttaaacaaatt
cagcctgtaaaatatcatcaaggaagagcatacacgtatttttttatgcattcccatgaa
gtagaattgtctcccatttttttgaatgcctttaggagagtagcgatcaaacatttaaaa
ggaggcagagttacagccttgagaatcccaaatatgaaacatgaattttattgtatagtt
ggagtaagagaaaacttttttgatttagctcagaatttaagacatatcacttttaaaaat
gtacctgagcatgcagatatggataattacatcacagggaagtttcggataaagggacct
atgatcgttgtggctggacatatgcaattaccaaaaggaatcgaaattgttaacaaaaat
cagtatatctgttccgtgtccgctggaagctatctagaaatggatgtaaaaattgaaagt
attgaagagtatgtcatgccagaatatggaagccaatcacgaaatagagacatttgtaaa
gacaattttattcattttagcagtagttgcacacctgtggaatattttggatttatggga
caaaggagagggatcaatttggatacccttggcgaaattaacattgtcgaaatgcacacg
gatggttctattacccccaaaagtgccctattaaaaactattgattatatatctgaaaat
tttcagtacatggaaaatgcactatacaataattgccacacatgtgatgatggatctgtt
caggaagaatttaggaatccagaattttatatggacaaagatagatatactgatgtgcca
tggaataaatataaaacaacagcagaagaattggaggataccaaaaaatggctttataga
aaggatgtgcataggcaatatgacatagacccagaaagtgcgcagtcgaaacaggaaaga
gaaattttatgggagaaaaagaaaaaatttctgaaagaaattgataaaagacgagaacaa
attaagaaaggaccatctgtatccgagggggaatatattccatctgaagaaagacatgac
tgcttgctcgattggcccgtggacaaatctgagagaaatatgaacccccccagatgggtc
attgaacggcctctcgatagaaatccgcacataggtcacgaggaaatttacgacgagggt
atatag
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