KEGG   Plasmodium cynomolgi: PCYB_146050
Entry
PCYB_146050       CDS       T02490                                 
Name
(RefSeq) splicing factor 3B subunit 3
  KO
K12830  splicing factor 3B subunit 3
Organism
pcy  Plasmodium cynomolgi
Pathway
pcy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PCYB_146050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcy03021]
    PCYB_146050
   03041 Spliceosome [BR:pcy03041]
    PCYB_146050
   03036 Chromosome and associated proteins [BR:pcy03036]
    PCYB_146050
Transcription machinery [BR:pcy03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     PCYB_146050
Spliceosome [BR:pcy03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    PCYB_146050
 Complex B
    PCYB_146050
 Complex C
   U2 SnRNP specific factors
    PCYB_146050
Chromosome and associated proteins [BR:pcy03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     PCYB_146050
    TFTC complex
     PCYB_146050
SSDB
Motif
Pfam: Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7 Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 14695558
NCBI-ProteinID: XP_004225123
UniProt: K6UEY8
LinkDB
Position
14:2304665..2309175
AA seq 1286 aa
MPVLYHLTLQKPTAITKIAYGNFSGPKVHEIVVSKGQVLELLRADKQGKLNLIASKDVFG
IIRCLQTFRLTGSNKDYVVIGSDSGRLVILQFSNEKNDFVRVHCETYGKSGLRRIIPGEY
IAVDPKGRALMICAIERQKFVYILNRDTKEQLTISSPLDAHKSHTICHDVVGMDVGFENP
IFASIEQNYEMYDKQVTNTNEIDGCTRKTLLCLWEMDLGLNHVIRKHTLPIDSSAHLLIP
IPGGQQGPSGVIVCCDNYLVYKKVEHVDVYCAYPRRLETGQEKNISIVCSALHRIRKFFF
ILIQSEFGDLYKIEMDHEDGIVKEITCKYFDTVPVANAICVMKSGSLFVAAEFGNHFFYQ
FSGIGDDDNEAMCTSKHPSGRNAIIAFRTKKLTNLFLIDQVYSLSPILDMKILDAKNANS
PQIYALCGRGPRSSLRILQHGLSIEELADNELPGRPKFIWTIKKDNASDYDGYIIVSFEG
STLILEIGETVEEVVDSLLLTNVTTIHVNILYDNTLIQVHDTGIRHINGKVVHEWVPPKN
KQIKAATSNSTQIVISLSGGELIYFEIDESHTLVEIFRKNLNVETLCLSIQQVEENKLRA
NFLAVGCLDNVVRLLSIEKEKYFNQLSTFILPNNSSAQDICISQMCELGNDKERKLIFLN
IGLNNGVLLRSVVDPITGTLTNHYSKYLGAKNVKICPVHLKKNSALLVLCEKTYLCYVHQ
GKYIYSPLNYDILEYASSFHSEQCSDGYVAISGSSLRIFRFYRLGEVFSQNILHLTFTPR
KIVPLPFPSLFYDHDTSIEIERQKNIRMLAIIEADHNAYDENTLREIQRALKGIHLEGEE
HTGADGPPSHSVGSDLQRNLPNGAHKQGHSANQHVDRLDQAGNTEMESALVENASGHQHR
EENGDAGEEEGEEEEEEEEELLYDRIGTFKAGPGKWGSCIKIIHPISLQTIDKISLEMEE
AALSVCACELEALHCLIVGTTTNLSLKNRTAPAAALRVYTYDINYKLNLLHITPVEDQPF
CFCPFNGRLLASIGNKLRIYALGKKKLLKKCEYKDIPEAIISIKVSGDRIFASDIRESVL
IFFYDSNMNTLRLISDDIIPRWITCSEILDHHTIMAADKFDSVFVLRVPEEAKQEEYGIS
NKCWYGGEIMAGSNKNRRLEHIMSFHVGEIVTSLQKVKLSPTSSECIIYSTIMGTIGAFI
PYDNKEELELTQHLEIILRTENPPLCGREHIFFRSYYHPVQHVIDGDLCEQFSSLPYDVQ
RKVAADLERTPDDILRKLEDIRNKIL
NT seq 3861 nt   +upstreamnt  +downstreamnt
atgccggtgctgtaccacctgacgctgcagaagcccacggccatcaccaaaatcgcgtat
ggaaatttctcggggccgaaggtgcacgaaatcgtggtgtccaaggggcaagtgctggag
ctgctaagggcggacaagcagggcaagctaaatctgatagcatcaaaggacgtattcggc
atcatccgttgcttgcagacgtttcggctgacaggaagcaacaaggattatgtagtgatt
gggagtgactcagggaggttagtgattcttcagtttagtaatgagaaaaatgatttcgtg
cgagtgcactgtgagacgtacggtaagagtggccttcggagaatcataccaggagagtac
atagcagtggatccaaaaggaagagccctcatgatatgtgccatagaaagacagaaattt
gtgtatattctaaatcgagacactaaagagcaattaactattagcagccccttagatgca
cataaatcacacaccatatgtcatgacgtagtcgggatggacgttggatttgaaaaccca
atatttgcatcgattgaacagaattacgaaatgtatgataagcaggtaactaacacaaat
gagatcgatggatgtacaagaaaaactctgttatgtctatgggaaatggatcttggatta
aatcatgtcattagaaagcatacgctccctattgattcgagtgcacatttattaataccc
attcctggaggacaacaaggaccaagtggagtcatagtctgttgtgataattatttggta
tacaaaaaggtggaacatgtagatgtgtattgtgcataccctaggagactcgaaacggga
caggagaaaaatatttccatagtgtgcagtgcacttcacagaattagaaaattttttttt
attcttattcaatccgaatttggtgatctgtacaaaatagaaatggatcatgaggatggg
attgtaaaagaaattacttgcaaatatttcgacacagttcctgtagccaacgctatatgt
gtgatgaagtccggctctctctttgtagcagctgaatttgggaaccattttttttatcaa
ttctcaggtataggagatgatgataatgaggccatgtgtacgtctaaacatccctcagga
aggaatgctatcattgcatttaggactaagaagcttacgaatttatttctcatagatcaa
gtatattctctttctcccattttggatatgaaaattctcgatgcgaagaatgccaacagt
cctcaaatttatgccctgtgtggtaggggccctaggtcatctcttcgcattttgcaacat
ggattgagtatagaagaactagccgataatgaactacctggaagacctaaatttatttgg
actattaaaaaagacaacgcaagtgactatgatgggtatatcattgttagctttgaagga
agtacactcatcttggaaattggagaaacagtggaggaggttgtagatagtttacttcta
accaatgtgacaactattcatgtaaatatactctacgataacactcttattcaagtacac
gatacaggtataagacatataaatggcaaagtcgtacacgagtgggtacctcctaaaaat
aagcaaatcaaagcagccacgtcaaatagtactcaaattgtaatctcacttagtggagga
gagttaatctatttcgaaattgatgagtcacacactttagtagaaatatttaggaaaaat
ttaaacgtggaaacgttgtgtctttccatacaacaggttgaggagaacaaactgagagcc
aacttcctagctgttgggtgtttagacaatgtagtgaggttactctccatcgaaaaggaa
aaatatttcaatcagttatccacctttattttgccaaataattcatcagctcaggatata
tgcatctctcagatgtgtgaattaggaaacgataaggagagaaaattgattttccttaac
atcggtttgaacaacggagtgcttctcagaagtgtggttgatcccattacaggtacactc
actaaccattactcaaaatatcttggtgcaaaaaatgtaaaaatatgtccagttcatctt
aagaaaaactcagctcttttagtgttatgtgaaaagacctacttatgttatgttcaccag
ggaaaatatatttactctcctttaaattatgacatcttggagtatgcttcatctttccat
tctgagcagtgctccgatgggtatgttgccatttctggaagtagtttgcgtatcttccgc
ttctaccgcttaggggaagtgttcagccaaaatattttgcatttaacatttactccaagg
aagatcgtacctcttcccttcccttctctcttttacgatcacgacacttctatcgaaatt
gagcgacagaagaacatccgaatgctcgccatcatcgaggctgatcataatgcttacgac
gagaatacgttgcgcgaaattcaaagagcactcaagggtattcatctcgagggagaggaa
catacaggtgcggacggacccccctcccactctgttgggagcgatctgcagcggaacctc
cccaatggggcgcacaaacagggacattcagcaaatcagcacgtggacagactggaccaa
gcgggaaacacagagatggagagcgcacttgtagaaaacgcgtcgggtcaccaacacagg
gaagagaacggcgacgcgggggaagaagaaggagaggaggaggaggaggaagaagaagaa
ctgctgtacgatcgaataggaacgttcaaggcagggccgggtaagtggggctcctgcata
aagataatccacccaatcagtctgcaaacaatagataaaatatccctcgagatggaagaa
gcggcgttgagtgtctgtgcctgtgagctggaggctctgcactgtttaatcgttggcacg
accacgaacttgtccctaaaaaatcgaacagctccagcagcagctctccgtgtctacacc
tacgacataaattacaaactcaacctcctgcacataacgccagtagaagatcagccgttc
tgtttctgcccgttcaatggaaggcttttagcttctattggaaacaaactcagaatatat
gcactaggaaaaaaaaagttactaaaaaaatgcgaatataaggatatcccggaggccatt
atttccataaaggtttccggagatcgtatctttgcttccgacatccgagagtccgtttta
atttttttttacgactccaatatgaacacgttgaggttaatttcagatgacataatcccc
aggtggatcacctgctccgagattctcgaccaccacaccattatggcggcggacaagttc
gactccgtctttgtgctgcgggtgcccgaggaggccaagcaggaggagtatggcatatcg
aacaagtgctggtacggaggtgaaatcatggccggctcgaacaagaacaggcggctcgag
cacatcatgagcttccacgtcggagaaatagtcacgtccctgcagaaggtgaagctgtcc
cccaccagcagcgagtgcataatatattccacaatcatggggacaataggggcgttcatc
ccgtacgacaataaggaggagctggagctgacgcagcacctggaaatcattttgcggacg
gagaaccccccgctgtgtgggcgcgagcatatattttttcgttcctactaccaccccgtc
cagcacgtcattgacggagacctatgcgagcagttttccagcctgccatacgacgtccaa
aggaaagtagcagccgacttggagagaaccccggatgacattctgcgaaagttggaagac
attcgaaataaaattctttaa

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