Plasmodium cynomolgi: PCYB_146050
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Entry
PCYB_146050 CDS
T02490
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PCYB_146050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcy03021
]
PCYB_146050
03041 Spliceosome [BR:
pcy03041
]
PCYB_146050
03036 Chromosome and associated proteins [BR:
pcy03036
]
PCYB_146050
Transcription machinery [BR:
pcy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
PCYB_146050
Spliceosome [BR:
pcy03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
PCYB_146050
Complex B
PCYB_146050
Complex C
U2 SnRNP specific factors
PCYB_146050
Chromosome and associated proteins [BR:
pcy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
PCYB_146050
TFTC complex
PCYB_146050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
14695558
NCBI-ProteinID:
XP_004225123
UniProt:
K6UEY8
LinkDB
All DBs
Position
14:2304665..2309175
Genome browser
AA seq
1286 aa
AA seq
DB search
MPVLYHLTLQKPTAITKIAYGNFSGPKVHEIVVSKGQVLELLRADKQGKLNLIASKDVFG
IIRCLQTFRLTGSNKDYVVIGSDSGRLVILQFSNEKNDFVRVHCETYGKSGLRRIIPGEY
IAVDPKGRALMICAIERQKFVYILNRDTKEQLTISSPLDAHKSHTICHDVVGMDVGFENP
IFASIEQNYEMYDKQVTNTNEIDGCTRKTLLCLWEMDLGLNHVIRKHTLPIDSSAHLLIP
IPGGQQGPSGVIVCCDNYLVYKKVEHVDVYCAYPRRLETGQEKNISIVCSALHRIRKFFF
ILIQSEFGDLYKIEMDHEDGIVKEITCKYFDTVPVANAICVMKSGSLFVAAEFGNHFFYQ
FSGIGDDDNEAMCTSKHPSGRNAIIAFRTKKLTNLFLIDQVYSLSPILDMKILDAKNANS
PQIYALCGRGPRSSLRILQHGLSIEELADNELPGRPKFIWTIKKDNASDYDGYIIVSFEG
STLILEIGETVEEVVDSLLLTNVTTIHVNILYDNTLIQVHDTGIRHINGKVVHEWVPPKN
KQIKAATSNSTQIVISLSGGELIYFEIDESHTLVEIFRKNLNVETLCLSIQQVEENKLRA
NFLAVGCLDNVVRLLSIEKEKYFNQLSTFILPNNSSAQDICISQMCELGNDKERKLIFLN
IGLNNGVLLRSVVDPITGTLTNHYSKYLGAKNVKICPVHLKKNSALLVLCEKTYLCYVHQ
GKYIYSPLNYDILEYASSFHSEQCSDGYVAISGSSLRIFRFYRLGEVFSQNILHLTFTPR
KIVPLPFPSLFYDHDTSIEIERQKNIRMLAIIEADHNAYDENTLREIQRALKGIHLEGEE
HTGADGPPSHSVGSDLQRNLPNGAHKQGHSANQHVDRLDQAGNTEMESALVENASGHQHR
EENGDAGEEEGEEEEEEEEELLYDRIGTFKAGPGKWGSCIKIIHPISLQTIDKISLEMEE
AALSVCACELEALHCLIVGTTTNLSLKNRTAPAAALRVYTYDINYKLNLLHITPVEDQPF
CFCPFNGRLLASIGNKLRIYALGKKKLLKKCEYKDIPEAIISIKVSGDRIFASDIRESVL
IFFYDSNMNTLRLISDDIIPRWITCSEILDHHTIMAADKFDSVFVLRVPEEAKQEEYGIS
NKCWYGGEIMAGSNKNRRLEHIMSFHVGEIVTSLQKVKLSPTSSECIIYSTIMGTIGAFI
PYDNKEELELTQHLEIILRTENPPLCGREHIFFRSYYHPVQHVIDGDLCEQFSSLPYDVQ
RKVAADLERTPDDILRKLEDIRNKIL
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgctgtaccacctgacgctgcagaagcccacggccatcaccaaaatcgcgtat
ggaaatttctcggggccgaaggtgcacgaaatcgtggtgtccaaggggcaagtgctggag
ctgctaagggcggacaagcagggcaagctaaatctgatagcatcaaaggacgtattcggc
atcatccgttgcttgcagacgtttcggctgacaggaagcaacaaggattatgtagtgatt
gggagtgactcagggaggttagtgattcttcagtttagtaatgagaaaaatgatttcgtg
cgagtgcactgtgagacgtacggtaagagtggccttcggagaatcataccaggagagtac
atagcagtggatccaaaaggaagagccctcatgatatgtgccatagaaagacagaaattt
gtgtatattctaaatcgagacactaaagagcaattaactattagcagccccttagatgca
cataaatcacacaccatatgtcatgacgtagtcgggatggacgttggatttgaaaaccca
atatttgcatcgattgaacagaattacgaaatgtatgataagcaggtaactaacacaaat
gagatcgatggatgtacaagaaaaactctgttatgtctatgggaaatggatcttggatta
aatcatgtcattagaaagcatacgctccctattgattcgagtgcacatttattaataccc
attcctggaggacaacaaggaccaagtggagtcatagtctgttgtgataattatttggta
tacaaaaaggtggaacatgtagatgtgtattgtgcataccctaggagactcgaaacggga
caggagaaaaatatttccatagtgtgcagtgcacttcacagaattagaaaattttttttt
attcttattcaatccgaatttggtgatctgtacaaaatagaaatggatcatgaggatggg
attgtaaaagaaattacttgcaaatatttcgacacagttcctgtagccaacgctatatgt
gtgatgaagtccggctctctctttgtagcagctgaatttgggaaccattttttttatcaa
ttctcaggtataggagatgatgataatgaggccatgtgtacgtctaaacatccctcagga
aggaatgctatcattgcatttaggactaagaagcttacgaatttatttctcatagatcaa
gtatattctctttctcccattttggatatgaaaattctcgatgcgaagaatgccaacagt
cctcaaatttatgccctgtgtggtaggggccctaggtcatctcttcgcattttgcaacat
ggattgagtatagaagaactagccgataatgaactacctggaagacctaaatttatttgg
actattaaaaaagacaacgcaagtgactatgatgggtatatcattgttagctttgaagga
agtacactcatcttggaaattggagaaacagtggaggaggttgtagatagtttacttcta
accaatgtgacaactattcatgtaaatatactctacgataacactcttattcaagtacac
gatacaggtataagacatataaatggcaaagtcgtacacgagtgggtacctcctaaaaat
aagcaaatcaaagcagccacgtcaaatagtactcaaattgtaatctcacttagtggagga
gagttaatctatttcgaaattgatgagtcacacactttagtagaaatatttaggaaaaat
ttaaacgtggaaacgttgtgtctttccatacaacaggttgaggagaacaaactgagagcc
aacttcctagctgttgggtgtttagacaatgtagtgaggttactctccatcgaaaaggaa
aaatatttcaatcagttatccacctttattttgccaaataattcatcagctcaggatata
tgcatctctcagatgtgtgaattaggaaacgataaggagagaaaattgattttccttaac
atcggtttgaacaacggagtgcttctcagaagtgtggttgatcccattacaggtacactc
actaaccattactcaaaatatcttggtgcaaaaaatgtaaaaatatgtccagttcatctt
aagaaaaactcagctcttttagtgttatgtgaaaagacctacttatgttatgttcaccag
ggaaaatatatttactctcctttaaattatgacatcttggagtatgcttcatctttccat
tctgagcagtgctccgatgggtatgttgccatttctggaagtagtttgcgtatcttccgc
ttctaccgcttaggggaagtgttcagccaaaatattttgcatttaacatttactccaagg
aagatcgtacctcttcccttcccttctctcttttacgatcacgacacttctatcgaaatt
gagcgacagaagaacatccgaatgctcgccatcatcgaggctgatcataatgcttacgac
gagaatacgttgcgcgaaattcaaagagcactcaagggtattcatctcgagggagaggaa
catacaggtgcggacggacccccctcccactctgttgggagcgatctgcagcggaacctc
cccaatggggcgcacaaacagggacattcagcaaatcagcacgtggacagactggaccaa
gcgggaaacacagagatggagagcgcacttgtagaaaacgcgtcgggtcaccaacacagg
gaagagaacggcgacgcgggggaagaagaaggagaggaggaggaggaggaagaagaagaa
ctgctgtacgatcgaataggaacgttcaaggcagggccgggtaagtggggctcctgcata
aagataatccacccaatcagtctgcaaacaatagataaaatatccctcgagatggaagaa
gcggcgttgagtgtctgtgcctgtgagctggaggctctgcactgtttaatcgttggcacg
accacgaacttgtccctaaaaaatcgaacagctccagcagcagctctccgtgtctacacc
tacgacataaattacaaactcaacctcctgcacataacgccagtagaagatcagccgttc
tgtttctgcccgttcaatggaaggcttttagcttctattggaaacaaactcagaatatat
gcactaggaaaaaaaaagttactaaaaaaatgcgaatataaggatatcccggaggccatt
atttccataaaggtttccggagatcgtatctttgcttccgacatccgagagtccgtttta
atttttttttacgactccaatatgaacacgttgaggttaatttcagatgacataatcccc
aggtggatcacctgctccgagattctcgaccaccacaccattatggcggcggacaagttc
gactccgtctttgtgctgcgggtgcccgaggaggccaagcaggaggagtatggcatatcg
aacaagtgctggtacggaggtgaaatcatggccggctcgaacaagaacaggcggctcgag
cacatcatgagcttccacgtcggagaaatagtcacgtccctgcagaaggtgaagctgtcc
cccaccagcagcgagtgcataatatattccacaatcatggggacaataggggcgttcatc
ccgtacgacaataaggaggagctggagctgacgcagcacctggaaatcattttgcggacg
gagaaccccccgctgtgtgggcgcgagcatatattttttcgttcctactaccaccccgtc
cagcacgtcattgacggagacctatgcgagcagttttccagcctgccatacgacgtccaa
aggaaagtagcagccgacttggagagaaccccggatgacattctgcgaaagttggaagac
attcgaaataaaattctttaa
DBGET
integrated database retrieval system