Plasmodium cynomolgi: PCYB_146100
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Entry
PCYB_146100 CDS
T02490
Name
(RefSeq) hypothetical protein
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCYB_146100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcy03000
]
PCYB_146100
03019 Messenger RNA biogenesis [BR:
pcy03019
]
PCYB_146100
04121 Ubiquitin system [BR:
pcy04121
]
PCYB_146100
Enzymes [BR:
pcy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
PCYB_146100
Transcription factors [BR:
pcy03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
PCYB_146100
Messenger RNA biogenesis [BR:
pcy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PCYB_146100
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PCYB_146100
Ubiquitin system [BR:
pcy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
PCYB_146100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Motif
Other DBs
NCBI-GeneID:
14695563
NCBI-ProteinID:
XP_004225128
UniProt:
K6UEY9
LinkDB
All DBs
Position
14:2323390..2328021
Genome browser
AA seq
1524 aa
AA seq
DB search
MKKGGSTDKRYLRRAFNRSYYYKKGEKAEEVSSGSKRVNGIAESSASGSTSERNNPNTGT
NASGKGAPNGASANGKGAAAGSKGKDVDVQSEEDPWDREREGADLDDEQLFYAVEGEAKN
RKVAKMTLNAKEKELLPKNEEECTNGSSANGKVLDETDRNFFPCDCGYQICLWCLYYIRD
HMCNKCPACRRSYDEKNFIYNRETHEKLVKKQKNNHKGSKTDANNTSNNNSTSAPNGVIA
SSGTGATTGVSNCTSPTNNTFLHHYSGTSSAIFNRPELYKNANTYNIHEHENLFEIIKGI
RVVQRNLVFVIGITSNYAKKNVLKKNEYFGKYGQILNIIVNKSQAYNPHYNGPSFSAYIT
YSNEKEAINAIYFIDGMVLDSKTLKASFGTTKYCASYLKNSTCTNEDCFYLHELGNVIDS
FSKDDIHGPKHIYHDLLYFYFKKHPDKKNEQSNNSHECSGTVVVKSARKSDDATIGGVAA
SGGGTSTSGPSAMPSFAAAMSITNEKDLADAKRKSDTLDEATHSKKQHSSATSVLSDGKA
KGLEVAGKGVERWADRGADKAADRGADKAAEEAKRDTKLKDGLASKGSKDNHHAGEEKSK
WSSEGNFASLIKNAGVATTSLQEVEEEKNNAQTKSKKKKKKQKSEEMIPPTDRGKEDHGA
SASASVNASVNASVGASASASAAQKEKNYRDSLQSNGASKNDNTSKNNSLDVEEDPYYVD
GMSENYPLITDVHFDKDKKKKMKKKAEKKKANERKKAEEVKMREAKEGEAKVGEAKVGEA
KVGEAKVGEAKVGEEKLGKAKPGESKLGESKLGEAKLGEAKLGEAKLGEAKTGAVKTGAV
KTGAAKTGAAKTGKAPTEEPPAEERKLDGKGGQSASDAVQKEQPSQKDFPPLREDDKDAK
KQKKKHPNGGSSAVNVSISGSINGSASGSVENKPAHVEDQPADGPKEKKQTGEQVQEEKK
SKYAKMTFKIGSFFNDLFDGSRKGGGGDEAKAKASPSVSQKANKKAPATVVTPSVVVAAE
DVQVGSAAQSKEEPSAEGAMSSKQKKVKGYEAEQEETNMKEDKMREKGERRKNEQSSQKK
DMEKVKADVGVGAKEKKEVVEEGAKKDRGGGSINQADKEDTPIGEGKIVRDSLGDDVAAT
AIATPCDTVNPPRTREKRDKKGAQDSNISQEEQMKKHAQEVLNIQKNNPDVPLQAIIEDF
IGRRTVATKEVLHFDDLNSAINSLIVENAAKGERSNNQHTGDSTAHACNVNTKEHLRNGE
GDEKKGDSAQMKEAEKVGAVKREGEGQAVEKTQKGMDSKNHVPCAKEKKKKDTLNKRKLQ
QKDMEGDVTSIIREMMMQRMTSKSRRNKNGSVRETSGKSEMGQADARISSGEDPTEKNAL
FDDMEIFLKNLCAAKGKAIQSSVGSNHQSSVGSNHQSSVGSNHQSNPQRNHQSNHQSNYQ
SNHQSNHQSNHQSTPQSSYADSDAVYLIEGNGRPKNDYLMYTGDEHISLKSHKGVMEFII
KKEKNVDVKKKIISTKIHLIFIKN
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggggggctccactgacaagcgctacttacggagggcattcaacaggtcctac
tattacaagaagggggaaaaggctgaggaggtgagcagtgggagtaaaagagttaacgga
atcgcggagagcagcgcgagtgggagcaccagcgagaggaacaaccctaacaccggtaca
aacgcgagtggcaaaggcgccccaaacggcgcgagtgcgaacggaaagggcgccgccgcg
ggcagcaaggggaaagacgtggatgtgcagagtgaagaagacccatgggacagggagcgt
gaaggagcagatttggatgacgagcagttattttacgccgtggaaggagaagcgaaaaat
agaaaagtcgcaaagatgacactgaacgcgaaggagaaggagttgctccccaagaacgaa
gaagaatgtaccaatgggagcagcgcgaatggaaaggtgttggacgagacggatagaaat
tttttcccctgcgattgtggttatcagatatgtctttggtgcttgtactacatacgagac
cacatgtgcaacaagtgccctgcttgtaggagaagttacgacgaaaaaaatttcatatat
aatagggagacccacgaaaaattggtgaaaaagcaaaaaaataatcacaagggaagtaaa
acagatgcaaataacaccagtaataataactccacgagtgctcccaacggagttatcgcc
tcttccgggacgggagcaactaccggagttagcaattgtacaagtcctaccaacaacact
tttcttcaccattacagtggaacgagcagtgccatttttaacagaccggaactgtacaaa
aatgcaaacacatataatatacacgagcatgaaaatttattcgaaattataaaaggaatt
agagtcgttcaacgcaacctcgtctttgtcattggtataacatccaactatgccaaaaaa
aatgtattaaaaaaaaacgaatattttggaaaatacggacaaattcttaacattattgtg
aataaatcccaggcttacaatcctcattacaatggcccgtcatttagtgcatacataacg
tatagtaacgagaaggaggctattaatgctatttattttattgatggtatggtcctggat
agcaaaacgctgaaggcatcgtttgggaccaccaagtactgtgcttcatatctgaagaac
agcacctgtaccaatgaggactgcttctacttacacgaattgggcaacgtcatagatagc
ttttccaaagatgatatacatggcccaaaacacatttatcatgacttgttatatttttat
tttaaaaaacacccagacaagaaaaacgagcagagtaataactctcatgagtgttccggt
actgtggtggtaaagtcggctagaaaatcggatgatgcaactatagggggagtggcagca
tccggaggaggcactagcacaagtggtccctccgcgatgccttcctttgctgcggccatg
tccatcacaaatgagaaggacttagccgacgcgaagagaaagagcgacacgctggatgag
gccactcactcgaagaagcagcactcgtcagcgacgtcggtgctctccgatgggaaggca
aaagggttggaggtagccggcaaaggggtagaaaggtgggcggacagaggagcggacaaa
gcagcggacagaggagcggacaaagcagcggaggaggcgaagagagacaccaagctgaag
gatggcttggccagcaaggggtccaaggataaccaccacgccggtgaggagaaaagcaag
tggagctccgaaggcaatttcgccagtctgataaagaatgctggcgtggcgaccacctcc
ttgcaggaggtggaagaagaaaaaaacaacgcacagaccaagagcaagaagaagaagaaa
aagcaaaagagcgaggagatgatcccgcccaccgatcggggcaaggaagaccacggtgcg
agtgcaagtgcgagtgtaaatgcgagtgtaaatgcgagtgtaggtgcgagtgcgagtgcg
agtgccgcgcagaaggagaagaactatagggactccctccaaagtaacggcgcatccaag
aatgacaacaccagtaaaaacaacagcctcgatgtggaggaggacccctactacgtcgac
ggcatgtcggagaactacccgctcataacggatgtccatttcgacaaagataagaaaaag
aagatgaaaaagaaggcagaaaagaagaaggccaacgagaggaagaaggcggaggaggtc
aagatgcgcgaagcgaaggagggagaagcgaaggtgggcgaagcgaaggtgggagaagcg
aaggtgggcgaagcgaaagtgggcgaagcgaaagtgggcgaagagaagttgggaaaggcc
aagccgggagagtccaaactgggagagtccaaactgggagaggccaaactgggagaggcc
aaactgggagaggccaaactgggagaggccaaaaccggtgcagtcaaaaccggtgcagtc
aaaaccggtgcagccaaaaccggtgcagccaaaacgggaaaggcccccacggaagaaccc
cctgcggaagagcgcaagcttgatggcaagggcggacaatcagcttcggacgctgtgcag
aaggagcagccctctcagaaggacttcccccctctgagggaggacgacaaggatgctaag
aaacaaaagaagaagcaccccaacggcggtagcagtgccgtcaacgtgagcatcagtgga
agcatcaatggcagcgccagtggcagcgtggagaataagccagctcatgtggaagaccag
ccggcagacggtcccaaggagaagaagcaaaccggcgagcaggtacaggaggagaaaaaa
agcaagtatgccaaaatgacattcaaaattggaagcttctttaatgatctctttgatgga
agtagaaaagggggtggtggtgacgaggcaaaggcgaaggcatctcccagtgtgagtcag
aaggcaaacaagaaagcgcctgccactgttgttactccctctgtggtggtagcagcggag
gatgtacaggtgggaagcgccgcccagtcgaaagaagaacccagcgcggaaggggcaatg
tcttcaaagcaaaagaaggtgaaaggttacgaagcggaacaggaagaaacaaacatgaaa
gaggataaaatgagagagaagggagagaggaggaagaatgagcaatcctctcaaaagaag
gacatggaaaaggtgaaagctgatgtaggagttggtgcaaaggagaagaaggaagtagtg
gaagagggggccaagaaggacaggggtggtggatctatcaaccaagctgataaggaggac
acacctattggagaaggcaaaattgtacgtgactcactcggagatgacgtcgcagcgact
gctattgctactccatgtgacacggtgaaccctcctcgcacacgagaaaagcgagacaaa
aaaggcgcacaagatagtaatattagtcaggaagaacagatgaagaagcacgcccaggaa
gtattaaatattcaaaaaaacaacccagatgtgcccctccaagcaataattgaagatttt
atcggaaggagaacagtcgccacgaaggaggttctccattttgatgacctcaacagtgcg
ataaatagccttatcgttgagaatgcagcgaaaggggaaaggagtaacaaccaacataca
ggcgatagtactgcccacgcttgcaatgtgaatacgaaggagcatctgcgtaacggagag
ggagatgaaaagaagggtgactctgcacaaatgaaagaggcagaaaaagtaggggctgtg
aagcgagagggggaaggacaagcagtcgaaaagacacagaaggggatggactcgaagaac
catgtaccatgtgcgaaagagaaaaagaaaaaggataccctgaacaagaggaagctgcag
cagaaagatatggaaggagatgttacgagcattattagagaaatgatgatgcagaggatg
acgtcgaaaagtaggagaaacaaaaatggatctgttcgcgaaacgagtgggaagagcgag
atggggcaagcggatgcgcgcatcagttcaggggaagaccccacagagaaaaatgccctt
ttcgacgacatggaaatatttttaaaaaatctgtgtgcggctaaggggaaggcaattcaa
agcagcgttggaagcaaccaccaaagcagcgttggaagcaaccaccaaagcagcgttgga
agcaaccaccaaagcaaccctcaaagaaaccaccaaagcaaccaccaaagcaactaccaa
agcaaccaccaaagcaaccaccaaagcaaccaccaaagcacccctcaaagcagttacgca
gatagcgacgccgtctatttgatagaaggaaacgggaggcccaaaaatgactacctcatg
tacacaggtgacgagcacatttccctcaaatcacacaaaggtgttatggaatttatcatt
aaaaaggagaaaaacgtagacgtaaaaaaaaaaattatctccacgaagatccatttgata
tttataaagaattaa
DBGET
integrated database retrieval system