Plasmodium cynomolgi: PCYB_146160
Help
Entry
PCYB_146160 CDS
T02490
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PCYB_146160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcy03019
]
PCYB_146160
03041 Spliceosome [BR:
pcy03041
]
PCYB_146160
Messenger RNA biogenesis [BR:
pcy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PCYB_146160
Spliceosome [BR:
pcy03041
]
Complex B
Other components
Prp19-related factors
PCYB_146160
Complex C
PCYB_146160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_M
TPR_14
HAT_PRP39_N
TPR_2
TrAA12
SNAP
ANAPC3
TPR_1
Motif
Other DBs
NCBI-GeneID:
14695569
NCBI-ProteinID:
XP_004225134
UniProt:
K6VII5
LinkDB
All DBs
Position
14:complement(2353143..2357037)
Genome browser
AA seq
989 aa
AA seq
DB search
MELYGELYDCDELLDEYNADYGDGKRPWGEALIGEDPTAQCVENEAHVKNIEIDIKSNQK
NVSTQYLFLYINTFKQKNIRSDKTLYVVNFYDIHMKNDDKNVLETEKDIVEYCLENVSRA
KRRDRGGHDGGGDGDGSGDGDGSGDGDGSGDGDTGADSMPAGQRSKYYLFKIYETILKYF
PFSFKLWYHYLKDRIEMLTGIYYDEKEEYEDVNRVFEQCLLYMYHFKAMYILYIQFLFLQ
RKVQNIRLIFNLALQNITLNQHEDLWEYQLKYIEKIKSKLINYEYIKRYVTIYPENIVHL
FNHYVKYKMCKHALNTFFYMISCDEVENIQMGDKTIYDLYRDMFQLISSRKCLGNDVLVT
LRKNFDSLKRYENVTSIYTLLANSFVYEGRWNKAMDAYEEGILECYTVNDFAVLFEGYIE
TMKILIELKMRGGEGNEVRSGREEDSDEERGGREEDTDEERTGSEEDTDEERSGPPPSGD
DSVVDLYMDKINYLLDKRKAFIADIKLKNNQKNVYVWIGKIDAMETAEEKVDLYNRCLKH
FEDGDYTGRLSDVYISYAYFHYNRNEYDKAVNVFNRAIRDHNLKTLNEISSVYCSWIEVE
LLEGNFKQALRIARLAIDLSNGGRSSSIGGSSSIEGIGGSGRMMLMMKNGTGTNTHEESD
APFGRNTPMIRDDHFGTLNQNFNLLNNVKLACLILDLEINYGTIETSINLFDILYHKKII
TVKMVLSFANYLYEQKYFYECFKTYEKAISIFHYPYLYPVYVHYISKYVERYKDKNISYV
RELYRQAIYGMDGKTFIPKEFAKTVFLMYASFEENYGFLKRSLSIYKEAVPFLPEPDKVK
FYKIFISKVSKSYGVHKAREAFEEAIQTLKDDDAREICLLYIDMEYKLNEYERVRALYIY
TAQFTNPSVHMSFYQDWREFEALHGNEHTFRDMIRIKRSVLSLFSNSRSGNKPLGMLEND
DMNGLESAKRKLQEMIDNEESAQKRVKAD
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggaattatacggagagctctacgactgtgacgaattactggatgagtacaacgcggac
tacggggatggaaaacgtccgtggggggaagccctcataggtgaagatcccaccgcgcag
tgtgtagaaaacgaagcacacgtgaaaaacatagagatagacataaagagcaaccagaaa
aacgtatcaactcagtacctattcctttacatcaatacgtttaagcagaaaaacatcaga
agtgacaagactctctacgtggtgaatttctacgacatccacatgaagaatgacgataag
aatgtgctagagacggagaaggacatcgtggagtattgcttggaaaacgtttccagggca
aaaaggagggacaggggaggccacgatggtggcggcgatggtgatggcagtggcgatggt
gatggcagtggcgatggcgatggcagtggcgatggcgataccggtgcggactccatgccg
gccggccagcgctccaagtactacctgtttaagatctacgaaacgattctgaagtacttc
ccattcagcttcaagctatggtatcactacctaaaggatcgcatagaaatgttgaccgga
atttattatgacgagaaggaggagtatgaagacgtaaatcgagtgtttgagcagtgtcta
ctgtacatgtaccatttcaaggcaatgtacattttgtatatacaatttctgttcctccaa
aggaaggtacaaaatataagactcatctttaacctagccctacagaacatcaccctgaat
caacatgaagacttatgggagtatcagctaaaatatattgagaaaataaaaagcaagcta
atcaactatgagtatattaaacggtatgtgacgatttatccggagaatatcgttcacctt
tttaatcactatgtgaagtataaaatgtgcaagcatgcgttgaatacgtttttttatatg
atcagttgtgatgaggttgagaatatccaaatgggagataaaaccatatatgacttatac
agagatatgtttcaactaataagttcacgtaaatgtttggggaatgacgtgttggtaaca
ctgaggaaaaacttcgacagtcttaagaggtatgaaaatgtcacgtctatttatacgttg
ctagcgaatagcttcgtttatgaaggtcgttggaacaaggccatggatgcttatgaggag
ggcatcttagagtgctacacggtgaacgattttgcggttctctttgagggctacatcgag
acgatgaagattcttatcgagttgaagatgcgggggggggaaggaaacgaggtgagaagt
ggtagagaggaggacagtgacgaggagagaggtggtagagaggaggacactgacgaggag
agaactggtagcgaggaggacactgacgaggagagaagtgggccccccccctccggagac
gactccgtggtggacctctatatggataaaataaactacctactggacaagcgcaaggca
ttcatagcggatatcaagctgaagaacaaccagaagaacgtctacgtttggataggcaaa
atagacgcgatggaaacggcggaggagaaggtggacctctacaacagatgtttaaagcat
ttcgaagacggggactacaccggtcgactcagtgatgtgtatattagttacgcgtatttt
cactacaaccgtaacgagtacgacaaagcagtgaacgtgttcaatagagctatccgcgac
cataatttaaaaacgctgaatgaaatttcaagtgtgtactgctcctggatagaggtagag
ttacttgagggcaattttaagcaggccttgcgtatagctaggttagccatcgatcttagt
aacggcggaaggagcagcagcatcggcggaagcagcagcatcgaaggcatcggcggaagc
ggcaggatgatgcttatgatgaagaacggcacagggacaaacacacacgaagaaagtgac
gctccctttggaagaaacacaccaatgatacgagatgaccattttggaacactcaatcaa
aatttcaatcttttaaataacgtaaagttagcttgcctcatccttgatctggaaataaat
tatggcaccatcgaaacgtcaataaatctctttgatatcctgtaccataaaaaaatcatc
acagttaagatggtcctctcctttgccaactacctctatgaacaaaaatatttttatgaa
tgcttcaaaacatatgagaaggctatttcaattttccattatccttacctgtacccagtg
tacgtacactacataagtaaatacgtggagcgttacaaagataaaaatatttcatatgta
cgtgagctgtacagacaagccatttacggaatggatggaaaaacttttattccgaaggag
tttgccaaaactgtgttccttatgtatgcctcttttgaggagaactatggctttttgaag
aggtccctttccatttacaaggaggccgttcccttcctgcccgagccggacaaagtcaag
ttttacaagatcttcatttcgaaggtctccaagtcgtacggagtgcacaaggcaagggag
gccttcgaagaggccattcagactctcaaggacgacgacgcgcgtgaaatttgcctctta
tacatcgacatggagtacaagctgaacgaatacgagcgcgtccgggcgctctacatctac
acggcgcagttcaccaacccctctgtgcacatgtccttttatcaggactggcgagaattc
gaagcgctgcacgggaacgagcacacctttagggatatgataagaatcaagaggagcgtc
ctcagcctgttctcaaactcgcgcagcggcaacaagccattaggcatgctagagaacgat
gatatgaacggtttggagagtgccaaaagaaaactgcaagaaatgattgacaatgaggag
agcgctcagaaaagggtgaaggcagattga
DBGET
integrated database retrieval system
