Plasmodium cynomolgi: PCYB_146880
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Entry
PCYB_146880 CDS
T02490
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03022
Basal transcription factors
pcy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PCYB_146880
09124 Replication and repair
03420 Nucleotide excision repair
PCYB_146880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcy03021
]
PCYB_146880
03400 DNA repair and recombination proteins [BR:
pcy03400
]
PCYB_146880
Transcription machinery [BR:
pcy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PCYB_146880
DNA repair and recombination proteins [BR:
pcy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PCYB_146880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
14695642
NCBI-ProteinID:
XP_004225207
UniProt:
K6V216
LinkDB
All DBs
Position
14:complement(2656648..2659518)
Genome browser
AA seq
913 aa
AA seq
DB search
MVRTRKNIENMEIYDYMKELNEKIWSYLFEDSLAHEAILRSLNELEQIIISRLLFIQQVV
SERAMRLWINPNSLKKLSECIKNLVEAKILVESETKKDNYNQYKINEKFRHTMLNKIYKN
REDKIFIFNNNAKEQMEKEKNLHEKNLYPTKEEIANYAQMRWNNLLHFIASPKLSNRNDD
KGDLNRNKNKGRKKNQTDDEEYRPYGHFPYGGATHNVVNYTVVNYTVGKEDNGEENDEEE
DDGEDDGEDDGEDDGDDEGDNSDNEDHTAEERGNQNYRKKYEKGPNEEAKYDQYGYYYEQ
GESVEGAPPSGSAHKLNSHDANQYYTHHHSREKKKKKKKKKGVYAYKQNDLYYRSLQSEE
NGYLEEDNNNNNNEYSFFYSSSRKESPPSYTPCDSLIEVLKRKNFILQDDANSNKAVNMS
REAFSWFLKDIRSRIISLVLEYLLIIDDGYVTNIAREISTKYKKDSSSANTGSGGGSSAN
AQKGEIDYSVYGTYANHTAYPEHRGSDDIYSNHIHTTHQEKVKNDGGGTPCYVTEEKKDQ
KKSELYVKETLLLILSISQCTISHPIYLDNLTKSQKEFINFGIHIGLFLKRSEDYVFVTP
YALLLTINNLNVQNYVAVMNSLTLEGGSENAYNEYSAYGEDVGDNHLPSNSSNVVTTRTI
GMGRHGHMDGGAKKISEKYFHHYSLLQEEKKKRPPTSDTHQNIDKTKSTHELASHHLSTE
KKINGNNNLEMGLIVQSNFKVYLYTNSTLKINILSHLCELQARTPNMVVGILTRRSVLNA
YNSDITANQIIKFLESYAHPGRSNFKSSIPVNVITQLKLWESERHRLTLDDAIVFKSFEK
EFLPHLYQQIVVWANSKNYLLHYTPWPKNVNSPEFDAWMKSEKYLCCIYESKNEIIDKIK
EIREKLMKKRQNA
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggacgcgaaaaaatatcgaaaatatggaaatttatgactacatgaaggaactg
aatgaaaaaatatggagctacctgttcgaagactccctagcacatgaggcaatattacga
tccctaaacgagttagaacaaattatcatttcaagattgttgttcatacagcaggtggta
tccgaaagagcaatgcgcttgtggattaatccaaactctctaaaaaaattaagtgaatgc
ataaaaaatttggtcgaagcaaaaatacttgtagaaagtgaaacaaaaaaggataattac
aatcagtataaaataaatgaaaaattcagacatacaatgctgaacaaaatttataaaaat
agagaagataaaatttttatatttaataataacgcgaaggaacaaatggaaaaagaaaaa
aatctgcatgaaaaaaatttatatccgacgaaagaagaaattgcgaattatgcacaaatg
agatggaacaatttgctccattttattgcgtcccccaaattaagtaatcgaaatgacgac
aagggtgacctcaacaggaataaaaataaaggaaggaaaaagaatcaaacagacgatgag
gagtaccgcccctatggccacttcccctacgggggagccactcataatgtggtgaattat
accgtggtgaattataccgtggggaaggaggacaacggggaggagaacgacgaggaggag
gatgacggggaggatgacggggaagacgacggggaagacgacggagacgatgagggggat
aactcagacaatgaagaccacactgcggaggagcggggaaaccaaaactataggaaaaaa
tacgagaaaggcccaaatgaagaagccaaatatgatcagtacgggtactactacgaacag
ggtgaatctgtggaaggagcccccccaagtggaagcgcacacaagctgaatagccacgat
gcaaatcagtattatacgcatcatcatagtagggaaaagaagaagaaaaaaaaaaagaag
aagggagtttatgcctacaagcagaatgatctgtattataggagcttgcaaagtgaggaa
aatggctacctagaggaagacaataataataataataatgagtattcttttttctattca
agttcaagaaaggaaagccccccttcgtataccccatgcgatagcctaatcgaagtgctc
aagagaaaaaacttcatactacaggatgatgcgaatagcaacaaggcagtgaacatgagt
cgagaagccttctcatggtttctcaaggacatacgaagtaggataatatccctggtgctc
gaatatttgctcataatagatgatggctacgtcacaaacatcgcacgggaaatatccacc
aaatataagaaggacagtagtagcgcgaacaccggtagtggtggaggaagctctgcgaat
gcccagaaaggggaaatcgattactctgtctatggcacgtatgcgaaccatactgcttac
cccgagcatcgtggaagcgacgacatttacagcaaccatatccacacaacacatcaagag
aaggtaaaaaatgatggaggcggaaccccctgctatgtgacggaagaaaagaaggaccaa
aaaaagtcagaactgtatgtgaaggaaaccctattgctgatcctttctattagtcagtgt
accattagccatcccatatacctcgataatttaaccaaatcgcagaaggaatttatcaat
tttggcatccacattggtcttttcttaaagcgcagtgaggactacgtctttgtaactccc
tacgcattgcttctaacgataaataatttaaatgtacagaattacgtggctgtgatgaac
agcctgacgcttgagggggggtctgaaaacgcatacaacgagtatagcgcgtatggtgag
gatgtaggggacaatcatctccccagcaacagcagcaacgttgtgaccacacgcaccata
ggcatgggcagacatggtcacatggatgggggggcgaagaaaataagcgaaaaatatttt
caccactattccttattgcaagaggaaaaaaagaaaagaccccccacaagtgatacccat
caaaatatagataaaacaaaatctacacacgaattagctagccatcatttatccacagaa
aaaaaaattaatggaaacaataatctcgaaatggggctaattgtacagagtaattttaaa
gtctacctctacaccaattcaacattgaagataaatattttaagtcatttatgtgaatta
caagcaaggactcccaacatggtcgtaggaattttgaccagaaggagtgtcctaaatgct
tacaactcggatattactgcaaatcaaattatcaaatttttggagtcctatgcacaccca
ggcagaagcaattttaaaagctctatacctgtcaacgtgatcacacaattgaagctgtgg
gaatcggaaagacatagattaactcttgacgatgccatcgtctttaagtctttcgaaaag
gaattccttccccacctatatcagcaaatcgttgtctgggctaatagcaaaaattactta
ttgcattatacaccttggcctaaaaatgtcaactccccagaatttgatgcttggatgaag
tcggaaaagtacctctgctgtatctacgaatcgaagaatgaaatcatcgataagattaag
gaaattagggagaagctcatgaagaagcggcagaacgcgtag
DBGET
integrated database retrieval system