Pseudomonas chlororaphis PCL1606: PCL1606_01140
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Entry
PCL1606_01140 CDS
T03768
Name
(GenBank) type VI secretion protein
KO
K11895
type VI secretion system protein ImpH
Organism
pcz
Pseudomonas chlororaphis PCL1606
Pathway
pcz02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PCL1606_01140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcz02044
]
PCL1606_01140
Secretion system [BR:
pcz02044
]
Type VI secretion system
Imp/Vas secretion system core components
PCL1606_01140
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T6SS_TssG
HalOD2
Motif
Other DBs
NCBI-ProteinID:
AKA21569
UniProt:
A0A0D5XSA2
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All DBs
Position
120722..121729
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AA seq
335 aa
AA seq
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MDTTHGASAPALSGLTRVIREYSLFQAVLLVVDRLRDSHPGLSEEDLYDQLEFQANPSLG
FPGSDVDRVEFFEEHGQMRARLRFNLIGLFGSGSPLPAFYGEQALGDSEDGNPTRNFLDL
FHHRLQRLMLPIWRKYRYRASFKSGAIDPFSAQLFALIGLGGEDIRKAKELNWKRLLPYL
GLLSLRAHSAALIEAVLRYYFKHADLVIEQCIERRVEILEEQRNRLGRANSQLGEDLVLG
ERVRDRSGKFRIHIRQLDWQRFHEFLPIGFGYQPLCALVRFTLRDPLDYDIRLVLRQEEI
RELRIGEQNACRLGWTSWLGRERADGVVTLGSKIH
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggacaccacgcatggggcttcagcccctgctctaagcgggctgacccgggtcatccgc
gagtactcgctgttccaggccgtgttgctggtagtggaccggctgcgcgactcgcacccg
ggcctgagcgaagaggatctctacgaccagctggaattccaggccaacccgagcctgggt
ttccccggcagcgatgtcgatcgcgtggagtttttcgaagagcacgggcagatgcgcgcg
cgcctgcgtttcaacctgatcgggctgttcggctccggttcgccgttgccggcgttctac
ggcgagcaggccctgggcgacagcgaggacggcaacccgacccgcaatttcctcgacctg
ttccaccatcgcctgcagcggctgatgctgccgatctggcgcaagtaccgctaccgcgcc
agcttcaagagcggtgccatcgacccgttctccgcccagctgttcgccctgatcggcctg
ggcggcgaagacatccgcaaggccaaggagctgaactggaaacgcctgctgccgtacctg
ggcctgctcagcctgcgcgcccactcggcggcgctgatcgaggccgtgctgcgctactac
ttcaagcacgcggacctggtgatcgagcaatgcatcgagcgccgggtggagattctcgaa
gagcagcgcaaccgcctgggccgcgccaacagccagctgggcgaggacctggtgctgggc
gagcgggtgcgcgaccgcagcggcaagttccgcatccatatccgccagctcgactggcaa
cgcttccacgaattcctgccgatcggtttcggctaccagccgttgtgcgcgctggtgcgg
ttcaccctgcgtgacccgctggactacgacattcgcctggtcctgcgccaggaagaaatc
cgcgaactgcgcatcggtgagcagaacgcctgtcgcctcgggtggaccagttggctgggc
cgcgaacgcgcggacggcgtggtgaccctgggcagcaaaattcattaa
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