Pseudomonas chlororaphis PCL1606: PCL1606_01430
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Entry
PCL1606_01430 CDS
T03768
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pcz
Pseudomonas chlororaphis PCL1606
Pathway
pcz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PCL1606_01430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcz03400
]
PCL1606_01430
Enzymes [BR:
pcz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PCL1606_01430
DNA repair and recombination proteins [BR:
pcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PCL1606_01430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
AKA21598
UniProt:
A0A0D5XRB0
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All DBs
Position
complement(157180..157959)
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AA seq
259 aa
AA seq
DB search
MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA
EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSIATLLLPSGQNGDEDLN
QKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPERAWMDE
IVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgtcaatggtattcaggctgcagtggagcgaggtttgctc
agttggctgcaagcacagaatgccgacgtcatctgcctgcaggacacccgcgcctccgcc
tttgaactggacgatccggccttccaactggatggctacttcctttatgcctgcgatgcc
gaagttcccgcccaaggcggtgtggctttgtactcgcggttgcaaccgaaggctgtcatc
agcggtctcggcttcgagacggccgaccgctacgggcgctacctgcaagccgatttcgac
aaggtcagcatcgcgaccttgctgcttccttccgggcagaacggcgatgaagacttgaac
cagaagttcaagcttatggacgatttcgcccgttatctggataagcagcggcgcaaacgt
cgcgagtacatttattgtggctcgctgtacgtggcgcaacagaagctggatatcaagaac
tggcgcgacagccagcaatccccaggcttcctggcgcctgaacgcgcctggatggatgag
attgtcggcaacatgggttatgtcgatgccctgcgcgaagtcagccgcgaaggcgaccag
tacagctggtggccggacaacgaacaggccgagatgctcaacctgggttggcgcttcgac
tatcagttgttgaccccgggcctgcgtcgcttcgtacgcagcgcacgcttgccgcgccag
ccacgcttctcgcagcatgcgccgctgatcgtggactacgactggacgctgaccatctaa
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