Pseudomonas chlororaphis PCL1606: PCL1606_02050
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Entry
PCL1606_02050 CDS
T03768
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pcz
Pseudomonas chlororaphis PCL1606
Pathway
pcz00300
Lysine biosynthesis
pcz00470
D-Amino acid metabolism
pcz01100
Metabolic pathways
pcz01110
Biosynthesis of secondary metabolites
pcz01120
Microbial metabolism in diverse environments
pcz01230
Biosynthesis of amino acids
Module
pcz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PCL1606_02050
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PCL1606_02050
Enzymes [BR:
pcz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PCL1606_02050
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AKA21660
UniProt:
A0A0D5XS70
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Position
complement(224978..226225)
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AA seq
415 aa
AA seq
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MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAYADALAGIPHLVCFAVK
ANSNLGVLNVLERLGAGFDIVSRGELERVLAAGGAADKIVFSGVGKTRDDMRRALEVGVH
CFNIESSDELERLQQVAAELGVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIAAAED
VYIRAAQLPNLEVIGVDCHIGSQLTTLAPFLDALDRLLDLVDRLGECGIYLRHIDLGGGL
GVRYRDEEPPLAADYVKAVRERLDGRDLELVFEPGRFIVANAGVLLTRVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMEVSAVQPRTGEARTYDIVGPICETGDFLAKERRLALEEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLIDGEEAVEVRRRETVAELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgcgacggtgagctgttcgcggaaggtgtagcgttgtccgcc
attgccgaacgctttggcacaccgacctacgtctattcccgagcgcatatcgaagcgcag
taccgcgcgtacgccgatgccctcgccggcatcccgcacctggtctgcttcgcggtaaaa
gccaactccaacctgggtgtactgaatgtcctggagcgcctgggcgccggtttcgacatc
gtctcccggggcgagctggagcgcgtcctggcggctggcggtgcggcggacaagatcgtg
ttctccggcgtcggcaagacccgcgacgacatgcgccgtgccctggaagtcggcgtgcac
tgcttcaacatcgagtccagcgacgagctggagcgcctgcaacaggtcgccgccgaactg
ggcgttcgcgcaccggtctcgctgcgggtcaacccggacgtcgacgccggcacccacccg
tacatttccaccggcctcaaggaaaacaagttcggcatcgccatcgcagccgccgaagac
gtgtacatccgcgcagcccagttgccgaacctggaagtgatcggcgtcgattgccatatc
ggctcgcaactgaccaccctggcccccttcctcgatgccctcgaccgcctgctggacctg
gtggaccgcctgggcgagtgcggcatctacctgcgccacatcgacctcggtggcggcctg
ggcgtgcgttaccgcgacgaagagccgccattggccgccgactacgtcaaggcggtacgc
gaacgcctcgacggccgtgacctggaactggtcttcgaacccggacgcttcatcgtcgcc
aacgccggcgtcctgctgacccgggtcgagtacctcaaacacaccgaacacaaggacttc
gccatcgtcgacgccgcgatgaacgacctgatccgtccggccctgtatcaggcctggatg
gaggtcagcgccgtacagccgcgcaccggcgaggcacgcacctacgacatcgtcggcccg
atctgcgagaccggcgacttcctggccaaggagcgtcggctcgcgctggaagaaggcgac
ctgctcgccgtgcattcggccggtgcctacggtttcgtcatgagctccaactacaacacc
cgcggtcgcgctgccgaagtgctgatcgatggtgaagaagctgttgaagtgcgtcgccgc
gagacggtagccgagttgttcgctggcgaaagcctgctgccggagtaa
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