Pseudomonas chlororaphis PCL1606: PCL1606_03570
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Entry
PCL1606_03570 CDS
T03768
Name
(GenBank) RNA polymerase sigma 70
KO
K03089
RNA polymerase sigma-32 factor
Organism
pcz
Pseudomonas chlororaphis PCL1606
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcz03021
]
PCL1606_03570
Transcription machinery [BR:
pcz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PCL1606_03570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
IF2_N
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
AKA21812
UniProt:
A0A0D5XSV2
LinkDB
All DBs
Position
386728..387582
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AA seq
284 aa
AA seq
DB search
MTTSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLEAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDADWTDNSTSNLHEALEVLDDRSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKLSITA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttctttgcaacctgcttatgccttggtcccgggtgcgaacctggaggcctac
gtgcacacggtgaacagcattcccttgctgacgcccgagcaggagcgtgaactggccgag
agtctctactatgagcaggatcttgaggcggctcggcagatggtgctcgcccacctgcgt
tttgtcgtacatatcgcccgtagctattccggctacggtctggcccaggccgacctgatc
caggaaggcaacgtcggcctgatgaaggcagtaaagcgtttcaacccggaaatgggcgtg
cgcctggtgtcgttcgccgtgcactggatcaaggcggaaatccacgagttcatcctgcgc
aactggcgcatcgtgaaagtcgcgaccaccaaggcgcagcgcaagctgttcttcaacctg
cgcagccagaagaagcgcctggcctggttgaacaacgaagaagtccatcgcgtggcggaa
agcctcggcgtggaaccgcgcgaagtgcgcgagatggaaagtcgcctgaccggccatgac
atggccttcgacccagccgccgaagcggatgacgacagcgccttccaatcgccggccaac
tacctggaagaccaccggtacgatccggctcgccagctggaagacgccgactggaccgac
aactccaccagcaacctgcacgaggcgctggaagtgctggacgaccgtagccgcgacatc
ctctaccagcgctggctggcggaagagaaagccacgctgcacgacctggcgcagaagtac
aacgtctcggccgagcgtatccgtcagctcgaaaagagcgcgatgaacaagctcaagctg
tcgattaccgcgtaa
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