Pseudomonas chlororaphis PCL1606: PCL1606_05540
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Entry
PCL1606_05540 CDS
T03768
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pcz
Pseudomonas chlororaphis PCL1606
Pathway
pcz03030
DNA replication
pcz03430
Mismatch repair
pcz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCL1606_05540
03430 Mismatch repair
PCL1606_05540
03440 Homologous recombination
PCL1606_05540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcz03032
]
PCL1606_05540
03400 DNA repair and recombination proteins [BR:
pcz03400
]
PCL1606_05540
Enzymes [BR:
pcz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PCL1606_05540
DNA replication proteins [BR:
pcz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PCL1606_05540
DNA repair and recombination proteins [BR:
pcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PCL1606_05540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AKA22009
UniProt:
A0A0D5XTJ0
LinkDB
All DBs
Position
complement(579478..580185)
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AA seq
235 aa
AA seq
DB search
MSLFAWLRPASAPLDATQQRRRERLPGAPALGECSLREQRWVVLDLETTGLNLNRDQVLS
IGAVVIEDGAIDFSQQFERTLQRSEHKLSPSVLIHGLGPSAIAAGSDPVEALLDFMEFVG
DSPLLAFHAPFDQHMLGRALKDSLGYRLQHPFLDVAAMAPLLCPQASIREAGLDDWMNHF
KLHVGERHHAAADALATAELALILFSRARQQQIHSPLNLQQRLNQWKRRQQTHSF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttcgcctggctgcgcccggccagcgcgccgctcgacgctacccagcaacgg
cgccgcgagcgcctgcccggtgctccggcactgggcgagtgcagcctgcgcgagcagcgc
tgggtggtgctggacctggaaaccacggggctcaacctcaaccgcgatcaggtgctgtcc
atcggggcggtggtcatcgaagacggtgccatcgatttcagccagcagttcgagcgcacc
ttgcaacgcagcgagcacaagctcagccccagcgtactgatccatggcctggggcccagc
gcgatcgccgccggcagcgacccggtggaggccttgctggatttcatggagttcgtcggc
gacagcccgctgctggccttccatgcgccgttcgaccagcacatgctcggccgcgccctg
aaggacagcctgggttatcgtctgcagcatcccttcctcgacgtcgccgccatggccccg
ctgctatgcccgcaggcgtctatccgcgaagccgggctggatgactggatgaaccacttc
aagctgcacgtcggcgagcgccaccatgccgccgccgatgccctggccacagccgaactg
gcgctgatcctgttcagccgggcccgccagcagcagatccacagcccgctgaacctgcaa
cagcggctcaaccagtggaaacgccgccagcagacccactccttctga
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