KEGG   Pseudomonas chlororaphis PCL1606: PCL1606_07260
Entry
PCL1606_07260     CDS       T03768                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pcz  Pseudomonas chlororaphis PCL1606
Brite
KEGG Orthology (KO) [BR:pcz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcz03400]
    PCL1606_07260
Enzymes [BR:pcz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PCL1606_07260
    5.6.2.6  RNA 3'-5' helicase
     PCL1606_07260
DNA repair and recombination proteins [BR:pcz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PCL1606_07260
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr Helicase_C WH3_Lhr ResIII Cas3-like_C_2 DprA_WH AAA_22 PhoH
Other DBs
NCBI-ProteinID: AKA22181
UniProt: A0A0D5XSX7
LinkDB
Position
complement(752290..756594)
AA seq 1434 aa
MNLPQIPANALPGFHPAVSAWFHSRFPAATAAQARAWPLIRQRRSTLIAAPTGSGKTLTA
FLAVIDELVHRGLENGGTLPDQTLVVYVSPLKALSNDIQINLQDPLADITAQLERLGLPQ
LRISTAVRTGDTPQKDRSAMRKSAPHILVTTPESLYVLLGSASGRQMLASTRTVIVDEIH
AIAASKRGSHLALSLERLQALCDEPLTRIGLSATQKPIEAVSRFLVGHQRPCEIVDIGHA
RPRDLAIEVPPVPLSAVMANDVWELVYERLATLAREHRTTLVFVNTRRLAERLSRHLSER
LGKDAVAAHHGSLAKEFRLDAEQRLKRGDLQVLIATASLELGIDIGDVDLVCQIGSPRSI
SAFLQRVGRSGHQVGGTPKGRLFALTRDDLLECAALLDCVHRGELDTLQIPRAPLDVLAQ
QIVAEVSNQPWQEQALLEMIRRASPYSDLDEGHFQALLRMLAEGYNGRQGIRSAYLHRDT
VNRSLRGRRGSQLTAVTSGGTIPDNADYAVLLEPQALNIGSVNEDFAVESIAGDVFQLGN
TSYRILRVETGKVRVEDAHGQPPTIPFWLGEAPGRSAELSFAVARLLARLDALLGATPGQ
LQPALDWLGEHLGLDAASAEQLVDYLARARQALGALPSQDTLIMECFFDESGGTQLVIHT
PFGSRINRAWGLALRKRFCRTFNFELQAAASEDAIVLSLSTSHSFELDEVWRYLHSNSAE
HILVQALLDAPLFGVRWRWNAGVALALPRFVGGRKVAPQIQRMKSEDLIASVFPDQIACL
ENLAGERQIPEHPLVEQTLDDCLHEAMDSEGWLALLRRMERGELRLVSRDLPAPSPLAAE
ILSAKPYTFLDDAPLEERRTQAVLSRRWSDPQSSDDLGALDAEAIESVRAEAWPVPGNPD
EMHEALMSLAAIGAPEAQANPSWTDWLQALADSGRASRLQIADQPALWCAVERLACLRAI
YPQAALQPPLQAPPGFDEPWERDEAIVELIRARLSGFGPLLLEAITAPLGLGASEVTQAL
LQLEREGYVLRGRFSPGESREQWCERHLLARIHRYTVKRLRREIEPVSLQDLMRFLFDWQ
HLSSATQGQGSAMLAQTVAQFEGYAAAAGAWDSDLLPARIKDYSATWLDELCRNGKVVWT
RLSAPHKTAGATLRNTPIVLLPRSQVALWSALGAQPDSSELSPKAQKVHAALSQHGALFF
DELQHEAHVLRTELEIALQELVAAGWVNADSFAGLRALITPASKRQARPGRRGRGALVGG
MDDAGRWALLRRCAPTVDNPGRLEQATLEHIAMTLLRRYGVVFWRLLEREADWLPSWREL
LRTFHRLEARGEIRGGRFVSGLAGEQFALPEAVALLREVRRRPLDGSLVAVCGVDPLNLA
GTLLPGQKVPALAGNRLVYRDGLPAAAEIAGKQHVWLDLDPQASLELRTRLIRH
NT seq 4305 nt   +upstreamnt  +downstreamnt
atgaaccttccccagatccccgccaacgccctgccgggcttccatccggccgtcagcgcc
tggttccacagccgtttccccgccgcgaccgccgcccaggcccgtgcctggccactgatc
cgccagcgccgctcgaccctgatcgccgcgcccaccggctccggcaagaccctgaccgcc
ttcctcgcggtgatcgacgaactggtgcaccgcggcctggaaaacggcggcacgctgccg
gaccagaccctggtggtgtacgtctcgccgctcaaggccctgagcaacgatatccagatc
aacctgcaggacccgctggccgacatcaccgcgcagctcgaacgcctgggcctgccgcag
ttgcggatcagcaccgcggtgcgtaccggcgacaccccgcagaaagaccgcagcgccatg
cgcaagagcgcgccgcacatcctggtgaccacccccgagtcgctgtacgtgctgctgggc
tcggcttcgggccggcagatgctcgccagtacgcgcacggtgatcgtcgacgagatccac
gccatcgccgccagcaagcgcggcagccacctggccttgagcctggagcgcctgcaggcg
ctgtgcgacgagcccctgacccgcatcggcctgtcggccacgcagaaacccatcgaagcg
gtatcgcgcttcctcgtcggccaccagcgcccctgcgagatcgtcgacatcggccatgcc
cggccccgcgacctggccatcgaagtaccgccggtgccgctgtcggcggtcatggccaac
gatgtctgggagctggtctacgagcgtctcgccaccctggcgcgggaacaccgcaccacc
ctggtgttcgtcaacacccggcgcctggccgaacgcctgagccgccacctgagcgaacgc
ctgggcaaggacgcggtggccgcccaccacggcagcctggccaaggaatttcgcctggac
gccgagcagcggctcaagcgcggcgacttgcaggtgctgatcgccaccgcctcactggag
ctgggcatcgatatcggcgacgtcgacctggtgtgccagatcggctcgccgcgttcgatc
tcggcgtttctgcaaagggtcgggcgctccgggcaccaggtcggcggtacgcccaagggc
cgcctgttcgccctgacccgcgacgacctgctcgaatgcgccgccctgctcgactgcgtg
caccgcggcgaactcgacaccctgcagatccccagggcgccgctggatgtgctggcgcag
cagatcgtcgccgaagtcagcaaccagccgtggcaggaacaagcgctgctggaaatgatc
cgccgcgcctcgccctacagcgacctcgacgaagggcatttccaggcgctgctgcgcatg
cttgccgagggctacaacgggcgccagggcattcgcagcgcctacctccaccgcgatacc
gtcaaccgcagcctgcgcggccggcgcggcagccagctgaccgcggtgaccagcggcggc
accatccccgacaacgccgactatgccgtgttgctggaaccccaggcgctgaacatcggc
agcgtcaacgaagacttcgccgtggaaagcatcgccggcgatgtgtttcagctgggcaat
acctcgtaccgcatcctgcgggtggaaaccggcaaggtgcgggtcgaggatgcccacggc
cagccgccgaccattccgttctggctcggcgaggctcccgggcgcagcgccgagctgtcg
ttcgccgtggcgcgcctgctggcccggctcgacgcactgctgggcgccacgcccggacag
ttgcaaccggccctcgactggctgggcgagcacctgggcctggacgccgccagcgccgag
caactggtcgactacctggcccgcgcccgccaggccctgggtgcgctgccgtcccaggac
acgctgatcatggagtgctttttcgatgagtccggcggcacccaactggtgatccacacg
ccgttcggcagccggatcaaccgcgcctggggcctggccctgcgcaagcgtttctgccgc
accttcaacttcgaattgcaggccgccgccagcgaggacgccatcgtgctgtcgctgtcc
accagccacagtttcgagctggacgaagtctggcgctacctgcacagcaacagcgccgag
cacatcctggtccaggccctgctggatgcgccgctgttcggcgtgcgctggcgctggaac
gccggggtggcgctggcgctgccgcgctttgtcggcgggcgcaaggtcgcgccgcagatc
cagcggatgaaaagcgaagacctgatcgccagcgtgtttcccgaccagatcgcctgcctg
gagaaccttgccggcgagcggcagattcccgagcacccgctggtggagcagaccctcgac
gactgcctgcacgaggccatggacagcgaaggctggctggccctgttgcggcgcatggag
cggggcgagttgcgcctggtcagccgcgacctgccggcgccctcgccgctggccgcggag
atcctcagcgccaagccctacaccttcctcgacgatgcgccgctggaggaacgccgcacc
caggccgtgctcagtcgccgctggagcgacccgcaatcgagcgacgacctcggcgccctg
gatgccgaggccatcgagtcggtgcgcgcggaagcctggcccgttcccggcaacccggac
gaaatgcacgaagcgctgatgagcctggccgccatcggcgcaccggaagcccaggccaac
ccgtcctggacggactggctgcaggccctggcggacagcggccgcgccagccgtttgcag
atcgccgaccaaccggcgctctggtgcgccgtcgaacgcctggcctgcctgcgggcgatt
tatccacaggccgcgctgcaaccgccgctccaggccccccccggcttcgacgagccgtgg
gagcgggacgaagccattgtcgagctgatccgcgcgcggctcagcggtttcggcccgctg
ctactggaggcgatcaccgcgccgctgggcctgggcgccagcgaagtcacccaggccctg
ctgcaactggagcgcgagggttatgtgctgcgtggccgcttcagccctggcgagtctcgg
gagcagtggtgcgaacggcacctgctggcccggatccaccgctacaccgtcaagcgcctg
cgtcgggaaatcgaaccggtgtcgttgcaggacctgatgcgctttctgttcgactggcag
catctgtccagcgctacccagggccagggcagcgccatgctggcgcaaaccgtcgcccag
ttcgaaggctatgccgccgcggctggcgcctgggacagcgacctgctgccggcgcggatc
aaggactactccgccacctggctggatgagctgtgccgcaacggcaaggtggtctggacc
cggctcagcgcgccgcacaagaccgccggcgcgaccctgcgcaacactccgatcgtgctg
ctgccgcgtagccaggtggcgctgtggagcgccttgggcgcgcagccggacagcagcgag
ctgtcgcccaaggcgcaaaaggtccacgccgcgctgagccagcatggcgccctgttcttc
gacgaactgcagcacgaagcccatgtgttgcgcaccgagctggaaatcgccttgcaggaa
ctggtggccgcaggctgggtgaacgccgacagcttcgccggcctgcgcgccctgattacc
cccgccagcaaacgccaggcccgccctggccggcgcgggcgcggggcgctggtcggaggc
atggacgacgcaggacgctgggccctgctgcgccgttgcgcgccgaccgtggacaacccc
ggccgcctggaacaggcaacgctggaacatatcgccatgaccctgctgcggcgttatggc
gtggtgttctggcgcctgctcgaacgcgaggccgactggctgccgagctggcgcgaactg
cttcgtaccttccaccgcctggaagctcgtggcgagatccgtggcggacgctttgtcagc
ggcctggccggcgagcagttcgccctgcccgaggccgtcgccctgctgcgcgaagtgcgc
cggcgcccgctggatggcagcctggtcgcggtgtgcggcgtcgacccgctgaacctcgcc
ggcaccctgctgcccgggcagaaagtcccggcgctggccggcaaccgcctggtgtaccgc
gacggcctgcccgccgccgccgagatcgccggcaaacagcacgtctggctggacctcgac
ccgcaggccagcctggaattgcgcacccggctgattcgccactga

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