Pseudomonas chlororaphis PCL1606: PCL1606_07520
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Entry
PCL1606_07520 CDS
T03768
Name
(GenBank) farnesyl-diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pcz
Pseudomonas chlororaphis PCL1606
Pathway
pcz00900
Terpenoid backbone biosynthesis
pcz01100
Metabolic pathways
pcz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
PCL1606_07520
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pcz01006
]
PCL1606_07520
Enzymes [BR:
pcz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
PCL1606_07520
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
PCL1606_07520
2.5.1.29 geranylgeranyl diphosphate synthase
PCL1606_07520
Prenyltransferases [BR:
pcz01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
PCL1606_07520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AKA22207
UniProt:
A0A0D5XU23
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All DBs
Position
complement(778433..779320)
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AA seq
295 aa
AA seq
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MIAAYQASSQARVNAALETLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGA
RPEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA
FSALLDPRLSDSSAEIRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHK
TGALIEASVRLGALASGRAEKDELKSLQAYAQAIGLAFQVQDDILDVESDTATLGKRQGA
DIARDKPTYPALLGLEAAKAYALELRDQALHALRPFDAGAEPLRELARYIVERRH
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcggcctatcaggccagcagtcaggcccgggtcaatgctgcgctggaaaccctg
ttcaaggcgccgggccccgagctggagcgcctttatcaagcgatgcgctacagcgtgatg
aacggcggcaagcgcgtccgtccgctgttggcctacgccgcctgcgaagcccttggcgct
cgcccggaacaagccaacggcgcggcctgcgcggtggagctgatccacgcctattccctg
gtgcacgacgatttgccggcgatggacgacgacgacctgcgtcgcggccagccgaccacc
cacaaggccttcgacgaagcctgcgcgatcctcgccggcgacggcctgcagagcctggcc
ttcagcgccctgctcgacccgcgcctgagcgattcgagcgccgagatccgcctgcagatg
gtcagcgccctggcgctggccgccggccccgccggcatggtcggtggccaggccatcgac
ctcggttcggtcggcctcaagctggaccagaaagccctggaatacatgcaccggcacaag
accggcgcgctgatcgaagccagcgtccggctcggcgccctggccagcggccgggccgag
aaagacgaactcaagtccttgcaggcctatgcccaggccatcggcctggcattccaggtg
caggacgacattctcgacgtggaaagcgataccgcgaccctgggcaagcgccagggcgcc
gacatcgcccgcgacaagccgacctacccggccctgctcggcctggaggcggccaaggcc
tacgccctggagctgcgcgaccaggccctgcatgccctgcgaccctttgacgcgggcgcc
gagccgctgcgggagctggcgcggtatatcgtcgaacgccgccattga
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