Pseudomonas chlororaphis PCL1606: PCL1606_09140
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Entry
PCL1606_09140 CDS
T03768
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pcz
Pseudomonas chlororaphis PCL1606
Pathway
pcz00260
Glycine, serine and threonine metabolism
pcz00460
Cyanoamino acid metabolism
pcz00630
Glyoxylate and dicarboxylate metabolism
pcz00670
One carbon pool by folate
pcz00680
Methane metabolism
pcz01100
Metabolic pathways
pcz01110
Biosynthesis of secondary metabolites
pcz01120
Microbial metabolism in diverse environments
pcz01200
Carbon metabolism
pcz01230
Biosynthesis of amino acids
pcz01240
Biosynthesis of cofactors
pcz04981
Folate transport and metabolism
Module
pcz_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PCL1606_09140
09102 Energy metabolism
00680 Methane metabolism
PCL1606_09140
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PCL1606_09140
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PCL1606_09140
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PCL1606_09140
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PCL1606_09140
Enzymes [BR:
pcz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PCL1606_09140
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AKA22369
UniProt:
A0A0D5XUK2
LinkDB
All DBs
Position
complement(937348..938601)
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AA seq
417 aa
AA seq
DB search
MFSRDLTIAKYDADLFAAMEQEALRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANSAVYLALLSAGDTILGMS
LAHGGHLTHGAGVSSSGKLYNAVQYGIDANGLIDYDEVERLALEHKPKMIVAGFSAYSQI
LDFPRFREIADKVGAYLFVDMAHVAGLVAAGIYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANAEIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAQAMAGV
FIERGFDVVSGGTQNHLFLLSLIKQEISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgatctctttgccgccatggag
caagaagccctgcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
ccagcggtgatggaagctcaaggctcggtactgaccaacaaatacgccgaaggttaccca
ggcaagcgttactacggcggttgcgaatacgtcgacgtggtcgagcagctggccatcgac
cgcgccaaggaactgttcggcgccgactacgccaacgtccagccgcacgcgggctcgcaa
gccaactcggccgtttacctggccctgctgtcggccggcgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggtgctggcgtctcctcctccggcaagctgtac
aacgccgtgcagtacggcatcgacgccaatggcctgatcgactacgacgaagtcgagcgc
ctggccctcgagcacaagccgaaaatgatcgtggccggtttctctgcctactcgcagatc
ctggacttcccacgcttccgcgaaatcgccgacaaggtcggtgcctacctgttcgtcgac
atggcccacgttgcgggtctggttgccgctggcatctacccgaacccggtgccattcgcc
gacgtggtgaccaccaccacccacaagaccctgcgcggtccgcgtggcggcctgatcctg
gctcgcgccaacgccgagatcgagaagaagctgaactccgcggtgttcccgggcgcccag
ggcggcccgctggagcacgtgatcgcagccaaggcgatctgcttcaaggaagcgctgcag
cctgaattcaaggcctaccagcaacaagtggtgaagaacgcccaggccatggccggcgtg
ttcatcgagcgcggtttcgacgtagtttccggcggcactcagaaccacctgttcctgctg
tcgctgatcaagcaggaaatctccggtaaggacgccgatgccgccctgggcaaagcgttc
atcaccgtgaacaagaactccgtgccaaacgacccacgctccccgttcgtcacttccggc
ctgcgcttcggtactccggccgtgaccactcgcggcttcaaggaagccgagtgcaaggaa
ctggctggctggatctgcgacatcctggctgacctgaacaacgaagcggtgatcgacgcc
gttcgcgagaaagtcaaagccatctgcaagaagctgccggtatacggcgcctga
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