Pseudomonas chlororaphis PCL1606: PCL1606_09150
Help
Entry
PCL1606_09150 CDS
T03768
Name
(GenBank) diguanylate phosphodiesterase
Organism
pcz
Pseudomonas chlororaphis PCL1606
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_3
PAS_8
dCache_1
Robl_LC7
DUF5421
Motif
Other DBs
NCBI-ProteinID:
AKA22370
UniProt:
A0A0D5XU50
LinkDB
All DBs
Position
complement(938788..942627)
Genome browser
AA seq
1279 aa
AA seq
DB search
MSNATPPSSLRAPAPASGSPLRGTLKGVLATLVLLLLALLFWQLLDQLQQTRKDQRQHAI
DYNADLAEHLSLNLALNAQIALNLLPIVELPENTDQQQLLLKKLQLSLPELRAIALLDAK
GQVISSSDASAVDSAWFADLTSRSRGQRYYYSDVIGSPQAQLLLQQPGSGAKRYWVLQLA
PGFIQSLSLGPDQGTQPIWAIENRLSHKTLGRDNGSQAPVTTEEVANSVLVAPLGNSDWQ
LRGLFDERAVIEQLLPAFIAKCLLGLAFSLLPVIALLNMRRRQRQLHEGRRRYQDIFEGT
GVALCVLDISGLPAFLDKAQLHDSEQLKRWLENNPQQRLSLLEELRVTEVNQVALRLLNV
DSCEQAWKLLIEGSPLNSSAIGNQLLETVINQHRQLELEIRLCDAQGNDQHLWLVLRLPE
DPADYRAVILSISDITSRKLIELSLLEREGFWSDVVRTVPDHLYVQDVVSQRMIFSNHHL
GQTLGYNKTELHQMGEYFWEILLHPEDADLYHRLRQEQRQGGYLQLLQCHLRFRHRSGQW
RCFDIREQALARDKYDQVTRIIGVAKDITDQIEASESLRDSERRYRMLAESISDVIFSTN
SKMALNYVSPSVQSVLGYDVEWIFQNGWQSTIANPQQLTGIYTLMERIGKALDKPEQLAQ
LRNQVQTQLFLFDCLRADGRKIPIELRLVLVWDEHGAFEGVLGVGRDISQQRRAEKDLRM
AATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVAQVLDQLPNMLTVDEQQEAHLRYV
LKQLHQHSTWEGEVWLKRRNGEHYPAWVGITAVLDDEGDLASYVCFFTDISERKASEQRI
HRLAYYDALTHLPNRTLFQDRLHTALQSAERQKSWVVLMFLDLDRFKPINDSLGHAAGDR
MLKDMATRLLDCVDDDDTVARMGGDEFTLLLQPRASREIALNRAIHVAEQILASLVRPFV
LEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKNNFQFYQADMNASALER
LELESDLRHALEQQEFILYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPGDFIPVLEEL
GLVVDVGDWVIGEACRQLKAWHQAKVRVPKVSVNISARQFSDGQLGTRIATILKDTGLPP
ACLELELTESILMREVSEAMHILDGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDR
TFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQGYLFGRP
MPANSFEGQFSNDALFMFD
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
ttgtccaatgccaccccgccctcttccctgcgcgcgcctgcgcctgcgtccggctcgccg
ttgcgcggcaccctgaaaggtgtgctggccaccctggtcctgctgctgctcgccctgctg
ttctggcaactgctcgaccaactgcaacaaacccgcaaagaccagcgccaacatgcgatc
gactacaacgccgacctggccgagcacctcagcctcaacctggcgctgaacgcccagatc
gccctgaatctgctaccgatcgtcgagctgccagaaaataccgaccagcagcaactgctg
ttgaaaaaactgcaactgtccctgccggagctgcgggccatcgccttgctggacgccaag
ggccaggtcatcagcagcagcgatgccagcgccgtggacagcgcatggttcgccgacctg
acctcccgcagccgtggccagcgctactactacagcgacgtcatcggcagtccccaggca
caactgctgctccagcagcccggcagcggcgccaagcgttactgggtgctgcagctggcc
ccgggtttcatccagtccctgagcctgggtcccgatcagggcactcagccgatctgggcc
atcgaaaaccgcctgagccacaagaccctgggtcgcgacaacggcagccaggccccggtg
accaccgaggaagtagccaatagcgtgctggtggcgcccctgggcaacagcgactggcag
ttgcgtggcctgttcgacgagcgcgcggtgatcgagcaactgttgccggcattcatcgcc
aaatgcctgctcgggctggcgttttccctgctgccggtgattgcgctgctgaacatgcgc
cggcgccaacgccagctgcacgagggccggcgccgctaccaggacattttcgaaggcacc
ggggtggccctctgcgtgctggatatctccggcctgccggcgtttctcgacaaggcgcag
ttgcatgacagcgagcagctcaagcgctggctggaaaacaacccgcagcagcgtctgtcg
ctgctggaagaactgcgtgtcaccgaggtcaatcaggtggccttgcggctgctcaacgtc
gactcctgcgagcaggcctggaagctgctgatcgaaggcagcccgctcaacagcagcgcc
atcggcaaccagctgctggagaccgtgatcaaccagcatcggcagctggaactggaaatc
cgcctctgcgacgcccagggcaacgaccagcatctatggctggtgctgcgcctgccggaa
gatcccgccgactatcgagcggtgatcctcagcatcagcgatatcaccagccgcaagctc
atcgagctgtcattgctggagcgcgaaggcttctggtcggatgtggtgcgcaccgtgccg
gaccacctctatgtgcaggacgtcgtcagccagcggatgattttcagcaaccaccacctg
ggccagaccctcggctacaacaagaccgaactgcaccagatgggcgagtacttctgggaa
atcctcctgcatccggaagatgccgatctgtaccaccgcctgcgccaggaacagcgccag
ggcggctacctgcaactgttgcagtgccacctgcgctttcgccaccgcagcggccagtgg
cggtgcttcgatatccgcgagcaggccctggcgcgggacaagtacgaccaggtcacgcgc
atcattggcgtggccaaggacatcaccgaccagatcgaggccagcgaatccctgcgtgac
agcgagcggcgctatcgcatgctcgccgaaagcatcagcgacgtgattttctccaccaac
agcaagatggccctcaactatgtcagcccttcggtacagtcggtgctgggctatgacgtg
gagtggattttccagaacggctggcaatcgaccatcgccaacccgcagcagctgaccggc
atctacaccctgatggagcggatcggcaaggccctggacaagcccgagcaactggcgcaa
ctgcgcaatcaggtgcagacccagctgttcctgttcgactgcctgcgggccgatggccgc
aagattccgatcgagttgcgcctggtgctggtctgggacgagcacggcgccttcgaaggc
gtgctcggggtcggccgcgatatcagccagcagcgccgcgcggaaaaagacctgcgcatg
gccgccacggtattcgagcattcgacctcggcgatcctgatcaccgaccctgccggctac
atcgtccaggccaacgaggcgttcagccgggtcagcggctacgcggtggcccaggtgctc
gaccagttgccgaacatgctcaccgtcgacgaacaacaggaagcccacctgcgctatgtg
ctcaagcagttgcaccagcacagcacctgggagggcgaggtctggctcaagcgccgtaac
ggcgagcactacccggcctgggtcggcattaccgcggtgctcgacgacgaaggcgacctg
gccagctatgtgtgcttcttcaccgacatcagcgaacgcaaggccagcgaacagcgcatc
caccgcctggcctactacgacgccctgactcacctgcccaaccgcacgctgttccaggac
cgcctgcacaccgcgctgcaatcggcggagcggcagaagtcctgggtggtgctgatgttc
ctcgacctggaccgtttcaagccgatcaacgactccctgggccatgccgcgggcgaccgc
atgctcaaggacatggccacccgcctgctcgactgcgtcgacgatgacgacaccgtggcg
cgcatgggcggcgacgaattcaccctgctcctgcaaccgcgggccagccgtgagatcgcc
ttgaaccgggcgatccacgtcgccgaacagattctcgccagcctggtgaggccgttcgtg
ctcgaaggccgcgaattcttcgtcaccgccagtatcggcatcgctctcagcccccaggac
ggcaacgagctgagccagttgatgaagaacgccgacaccgcgatgtaccacgccaaggag
cgcggcaagaacaacttccagttctaccaggccgacatgaacgccagcgccctggagcgc
ctggaactggaaagcgacctgcgccacgccctggagcagcaggaattcatcctctactac
cagccgcaattcagcggcgacggcaagcgcctgaccggcgccgaggccctgctgcgctgg
cgccatccacggcgcggcctggtgccgccgggggacttcatcccggtgctcgaggagctg
gggctggtggtggatgtcggcgactgggtgatcggcgaagcctgtcgccagctcaaggcc
tggcaccaggccaaggtccgggtgccgaaggtgtcggtgaatatctcggcccggcagttc
tccgatggccagctgggcacgcgcatcgccaccatcctcaaggacaccggcctgccgccg
gcctgcctggagctggaactgaccgaaagtatcctgatgcgcgaagtcagcgaggcgatg
cacattctcgacgggctgaagaacctcggcctgagcatcgcggtcgacgacttcggcacc
ggctattcatcgctgaactacctcaagcagttccccatcgatgtgttgaagatcgaccgc
accttcgtcgacggcctgccctccggcgagcaggacgcgcagatcgcccgcgccatcatc
gccatggcccacagcctgaacctggcggtgatcgccgagggcgtggaaacccacgaacag
ctggacttcctgcgcgagcacggctgcgacgaagtgcagggctacctgttcggccgcccg
atgccggccaacagtttcgaagggcaattcagcaacgacgcgctgttcatgtttgattag
DBGET
integrated database retrieval system
