Pseudomonas chlororaphis PCL1606: PCL1606_11220
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Entry
PCL1606_11220 CDS
T03768
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pcz
Pseudomonas chlororaphis PCL1606
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcz03400
]
PCL1606_11220
Enzymes [BR:
pcz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PCL1606_11220
DNA repair and recombination proteins [BR:
pcz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PCL1606_11220
Prokaryotic type
PCL1606_11220
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CAP59_mtransfer
Motif
Other DBs
NCBI-ProteinID:
AKA22577
UniProt:
A0A0D5XV23
LinkDB
All DBs
Position
complement(1164926..1166386)
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AA seq
486 aa
AA seq
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MPQRPLQLIWLRSDLRLHDNTALHAATQRGPTVAVYLLSPGQWLAHDDAPCKVDFWLRNL
RQLSSDLARLNIPLLIREASSWDQAPQALLQLCRQLSVEALHVNEEYGIHESRRDTAVAS
LLKSQGVGFHSYLDQLLFRPGSVLTKSGGYFQVFSQFRKVCYSRLYSALPAQVATPGAQA
ALGITADAVPRHVEGFPTPSPQLQALWPAGEEAAQQRLGYFAEARLDHYQAERDLPARPG
TSQLSPYLAAGVLSPRQCLHAALQTNQGEFASGNPGAVTWINELLWREFYKHILVGYPRV
SRHRAFRPETEAVAWRDAPDELAAWQQARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFL
TKNLLIDWRLGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFNPLSQSQRFDSQ
GTFIRHWLPELAGLDAKDIHNPAAMGGLFGVPGYPAPMVDLGMSRERALAAFKNLPSRVD
ARGGQD
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaacgccccctgcaattgatctggctgcgcagcgacctgcgcctgcacgacaac
accgcgctgcatgccgcgacccagcgcgggccgacggtggccgtctatctgctgagcccc
gggcaatggctcgcgcatgacgacgcgccgtgcaaggtcgacttctggctgcgcaacctg
cgccagctgagcagcgacctggcgcggttgaacatcccgctgctgattcgtgaagcatcg
tcctgggaccaggcaccccaggccttgctccagctgtgccggcaactgtccgtcgaggcg
ctgcacgtcaacgaggaatacggcatccatgaaagtcgccgcgacaccgcggtggccagc
ctgttgaaaagccagggcgtggggtttcacagctacctcgaccaactgctgttccggccc
ggcagcgtgctgaccaaaagcggcggctacttccaggtcttcagccagtttcgcaaggtc
tgctacagccgactgtacagcgctttgccggcgcaagtggcgacgcccggggcacaagcg
gcgctggggataaccgccgatgcggtgccgcggcatgtcgaggggtttcccacgcccagc
ccacagctgcaagcactctggccggccggcgaagaggccgcccagcagcgcctggggtat
ttcgccgaggcccggctcgaccactaccaggccgaacgcgacctgccggccaggcccggc
accagccagctgtctccctacctggcggccggcgtgctgtcgccgcgccaatgcctgcac
gccgcgctgcagaccaaccagggcgagttcgccagcggcaaccccggcgcggtcacctgg
atcaacgagttgctctggcgtgagttctataaacacatcctggtgggctacccgcgggta
tcccggcatcgcgcgttccgcccggaaaccgaagccgtggcctggcgcgacgcacccgat
gaactggcggcctggcaacaagcccgtaccggcttgccgatcatcgatgccgccatgcgc
cagttgctggaaaccggctggatgcacaaccgcctgcggatggtcgtggcgatgttcctg
accaagaacctgctgatcgactggcgcctgggcgaacgatttttcatgcgccacctgatc
gatggcgacctggcggcaaacaacggcggctggcagtggagctcgtccaccggcaccgac
tcggcgccctacttccgtatcttcaaccccttgagtcaatcgcagcggttcgacagccag
ggcaccttcatccgccactggctgccggaactggcggggctggacgcaaaagatatccac
aacccggcggccatgggcgggctgttcggcgtacccggctacccggcgccgatggttgat
ctaggaatgtcgcgcgaacgcgccctggcggcgttcaagaacctgccttcgcgagtcgac
gccaggggcggacaggactag
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