Pseudomonas chlororaphis PCL1606: PCL1606_14680
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Entry
PCL1606_14680 CDS
T03768
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
pcz
Pseudomonas chlororaphis PCL1606
Pathway
pcz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PCL1606_14680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcz03400
]
PCL1606_14680
Enzymes [BR:
pcz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
PCL1606_14680
DNA repair and recombination proteins [BR:
pcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PCL1606_14680
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PCL1606_14680
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PCL1606_14680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AKA22923
UniProt:
A0A0D5XV24
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All DBs
Position
1521130..1522560
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AA seq
476 aa
AA seq
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MTSIFWYDYETTGINPRCDRPLQVAGIRTDFDLNEIGEPVNLYCQPGDDILPHPAACMIT
GITPGQLAERGLGEADFMTRVHAQLAAPGTCGAGYNTLRFDDEMTRYSLYRNFFDPYARE
WQGGNSRWDLIDVVRTAYALRPEGIAWPRDEEGRVSLKLERLTAANGIDHGHAHEALSDV
RATIALARLIRDKQPKLYDWLFQLRSKQKVMDQIRLLQPLVHISGRFSAARSYVGVVLPL
AWHPRNRNALIACDLHLDPQALLELDAETLRQRLYTRREDLAEGELPVPLKLIHINRCPV
VAPLNVLRGEDQQRLQLDMAQYKARALRLSDAQEVWRDKLAAIYASEDFAPSLDPEQQLY
DGFIGDRDRRLCEQVRNADPAQLGQEQWPFDDERLPELLFRYRARNFPETLSGQERETWK
TFCRQRLSDPQWGAPNTLESFNRASAELVVNATSIQRQVLDEWQAYCRSLALRLGL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
gtgacctccatcttctggtacgactacgaaaccaccggcatcaacccgcgctgcgatcgg
ccgctgcaggtggcagggattcgcaccgacttcgacctcaacgagattggcgagccggtc
aatctctattgccagccgggcgacgacatcctgccccatccggcggcttgcatgatcacc
ggcatcaccccgggccaactggccgagcgggggctcggcgaagccgacttcatgacccgg
gtgcacgcccagctggcggccccgggcacctgtggcgcgggctacaacaccctgcgtttc
gacgatgagatgacccgctacagcctgtaccggaatttcttcgacccttacgcccgcgag
tggcaaggcggcaacagtcgctgggacctgatcgacgtggtccgtaccgcctatgccttg
cgcccggaagggatagcctggccgcgggatgaagaagggcgggtgagcctcaagctggag
cggctgacggcggccaacggtatcgatcacgggcatgcccacgaagcgctttccgatgtt
cgcgccacgatcgccctggcccggctgatccgcgacaagcagccgaagctgtatgactgg
ctgttccagttgcgcagcaaacagaaggtcatggaccagatccgcctgctgcaacccctg
gtgcatatttccgggcgcttttccgcggcccgcagttatgtgggggtggtcctgccgttg
gcctggcatccacgcaatcgcaatgcgctgatcgcctgcgacctgcacctggatccgcag
gcgctgctcgaactggatgccgagacgctgcgccagcgcctgtacacccggcgcgaggac
ctggccgaaggcgagttgccggtgccgttgaagctgattcatatcaatcgttgcccggtc
gtcgcaccgttgaatgttttgcgcggcgaagaccagcagcgcctgcaactggacatggcg
caatataaggcccgggcgctgcggctaagtgacgcacaggaagtttggcgggataaactt
gcggctatttacgccagcgaggactttgcccccagcctcgatcccgagcagcagttgtac
gatggttttatcggtgaccgtgaccggcgcttatgcgagcaagtgcgcaatgccgatccg
gctcaattaggccaagagcaatggccgttcgatgatgaacgtttgccggaattattgttt
cgctatcgcgctcgtaactttcctgaaaccttgagtgggcaagagcgggaaacctggaaa
acattctgtcgccagcgcctgtccgacccgcagtggggggcgcccaataccctggaaagt
ttcaatcgggccagcgctgaactagtggtgaacgctacatcgattcagcgtcaggtactg
gatgagtggcaggcttattgccggtcgctggctctacgacttgggctttga
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