Pseudomonas chlororaphis PCL1606: PCL1606_15680
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Entry
PCL1606_15680 CDS
T03768
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pcz
Pseudomonas chlororaphis PCL1606
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcz03000
]
PCL1606_15680
Transcription factors [BR:
pcz03000
]
Prokaryotic type
Helix-turn-helix
Other families
PCL1606_15680
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_AsnC-type
CHRD
Motif
Other DBs
NCBI-ProteinID:
AKA23023
UniProt:
A0A0D5XVB0
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All DBs
Position
complement(1625179..1626048)
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AA seq
289 aa
AA seq
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MDRVRNLLEQIQNRLEELNKAERKVAEVILLNPQQATRFSIAALAQAASVSEPTVNRFCR
SFGVSGYPELKLQLAQSLASGAAYVSRAVEADDNPEAYTQKIFGSAIASLDSACQALDPN
LISRAVDLLIQARQIHFFGLGASAPVALDAQHKFFRFNLAVTAHADVLMQRMIASVAHTG
ELFVIISYTGRTRELVEVARIARENGASVLGLTAANSPLAKASTLSLNIPLPEDTDIYMP
MTSRIIQLTVLDVLATGMTLRRGVDFQPHLRKIKESLNASRYPVGDEFN
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgtgcgaaaccttctggaacagatccagaatcgccttgaagaattgaacaag
gcggaacgtaaagtcgccgaagtcatcctgctcaacccacagcaggcgacccgcttcagt
atcgccgccctcgcccaggccgcttcggtcagcgagccgacggtcaaccgcttctgccgt
tcgttcggcgtcagcggctatccggaactcaagctgcaactggcccagagcctggccagc
ggagcggcgtacgtcagccgcgcggtggaagccgacgacaaccccgaagcctatacccag
aaaatcttcggcagcgccatcgcctcgctcgacagcgcctgccaggccctggacccgaac
ctgatcagccgcgccgtcgacctgttgatccaggcccggcagatccacttcttcggcctc
ggcgcctcggccccggtggccctcgatgcccagcacaagttcttccgcttcaacctggcg
gtcaccgcccacgccgacgtgctgatgcagcggatgatcgcttcggtggcccataccggc
gagctgttcgtgatcatttcctacaccgggcgcacccgcgaactggtggaagtggcgcgc
atcgcccgggaaaacggcgcctcggtgctgggcctgacggccgccaactcgccgctggcc
aaggccagcaccctgagcctgaacatcccgctgccggaagacaccgacatctacatgccg
atgacctcgcggatcatccagctcaccgtgctcgacgtcctcgccaccggcatgaccctg
cgccgcggcgtggacttccagccgcacctgcgcaagatcaaggaaagcctcaacgccagc
cgttatccggtgggcgacgagttcaactga
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