Pseudomonas chlororaphis PCL1606: PCL1606_16420
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Entry
PCL1606_16420 CDS
T03768
Name
(GenBank) TetR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
pcz
Pseudomonas chlororaphis PCL1606
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcz03000
]
PCL1606_16420
Transcription factors [BR:
pcz03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PCL1606_16420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_24
TetR_C_6
TetR_C_41
HTH_22
PEP-utilisers_N
LacI
Motif
Other DBs
NCBI-ProteinID:
AKA23097
LinkDB
All DBs
Position
complement(1693674..1694282)
Genome browser
AA seq
202 aa
AA seq
DB search
MTAPKRLTDRKREAILQAAITEFRASGFDITSMDKIAATAGVSKRTVYNHFPSKEELFTE
ILHKLWASIRARADILYQPGLTLREQLRALLLAKLQLLADHNFLDLARVAIAATLHSPER
AQYMVARMGEREEGLMVWIRAAAADGRLKPLDPDFAAQQLHGMLKTFAFWPQVTLNRPPL
EAPEQQRIVESAIDMFLACYQA
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgacagctccaaagcgcctgaccgaccgtaaacgcgaagccatcctccaggcggcgatc
accgaattccgcgccagcgggttcgatatcaccagcatggacaagatcgcggcgacggcc
ggtgtttccaagcgcacggtgtacaaccactttcccagcaaggaagagttgttcactgaa
atcctgcacaagctatgggcgagcatcagggcgcgggcggacattctttaccagccagga
ttaaccctgcgtgaacagttgcgagcgttgttgctggccaagctgcaactgctggccgac
cacaacttcctcgacctggctcgggtcgccattgccgccactctgcactcccccgagcgc
gcccagtacatggtggcgcgcatgggcgaacgcgaagaaggcttgatggtatggattcgt
gcggccgcggcggacgggcggctcaagcccctggacccggacttcgccgcccagcagctg
catggcatgctcaagacgttcgccttctggccacaggtcaccctgaatcgccctcctctc
gaagcgccggaacaacagcgcatcgtcgaatcggcgatagacatgttcctggcctgttac
caggcctga
DBGET
integrated database retrieval system
