Pseudomonas chlororaphis PCL1606: PCL1606_19720
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Entry
PCL1606_19720 CDS
T03768
Name
(GenBank) TetR family transcriptional regulator
KO
K22108
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
pcz
Pseudomonas chlororaphis PCL1606
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcz03000
]
PCL1606_19720
Transcription factors [BR:
pcz03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PCL1606_19720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_24
TetR_N
TetR_C_4
Motif
Other DBs
NCBI-ProteinID:
AKA23427
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Position
2048228..2048851
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AA seq
207 aa
AA seq
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MDEQKALLVMRQLVANGQLTDPDSARGKLLQTAAHLFRNKGYERTTVRDLAGAVGIQSGS
IFHHFKSKDDILRAVMEETIHYNTALMRAELAEARDVRERVLALIRCELQSIMGGSGEAM
AVLVYEWRSLSAQGQADVLALRDIYEQIWLQVLGEAKTAGFIKGDVFITRRFLTGALSWT
TTWFRPDGSMTLEQLAEEALTLILKDV
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
gtggatgagcaaaaagcgctgctggtcatgcgccaactggtcgccaacggacagctgacc
gatccggacagtgcccgcggcaagctgctgcaaaccgcggcccacctgtttcgcaataaa
ggctacgaacgcaccacggtgcgcgacctggccggtgcggtgggcatccagtcgggcagc
atctttcatcacttcaagagcaaggacgacatcttgcgcgcggtgatggaagaaaccatc
cactacaacaccgccctgatgcgcgccgagctggccgaggcgcgcgatgtgcgcgagcgg
gtgctggcgctgatccgctgcgagctgcaatcgatcatgggcggcagcggcgaagccatg
gcggtgctggtctacgaatggcgctcgctgtcggcccagggccaggccgacgtcctggcg
ctgcgcgacatctatgagcagatctggctgcaggtgctgggcgaggccaagacggccggt
ttcatcaagggcgatgtgttcatcacccggcgctttcttaccggggcgctgtcctggacc
accacctggtttcgccccgatggcagcatgaccctcgaacagctggccgaagaagccctg
accctgatcctcaaggacgtgtga
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