Pseudomonas chlororaphis PCL1606: PCL1606_22280
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Entry
PCL1606_22280 CDS
T03768
Name
(GenBank) DeoR family transcriptional regulator
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pcz
Pseudomonas chlororaphis PCL1606
Pathway
pcz00300
Lysine biosynthesis
pcz00470
D-Amino acid metabolism
pcz01100
Metabolic pathways
pcz01110
Biosynthesis of secondary metabolites
pcz01120
Microbial metabolism in diverse environments
pcz01230
Biosynthesis of amino acids
Module
pcz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PCL1606_22280
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PCL1606_22280
Enzymes [BR:
pcz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PCL1606_22280
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AKA23681
UniProt:
A0A0D5XX92
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All DBs
Position
2362783..2363778
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AA seq
331 aa
AA seq
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MTSFYDARGNRYAVVAPARLHELGIALPASAAAAAQTRSRWSTQAIQAVCDWAPGTRPEG
AKAHRSDGLLVGPFQDTAPFDLLIVNTDGTLAERSGNGLTIFSQALAEQGLLQAQGPTVL
RVHHDTAEGVSPVATVVEPAQVAGVAGFWLDLGQPSFGAQAVGARQGIERDASSCLDLSR
VSGLARLRPEWSRSQFVRIGNPHCVTLVDDASALPSNRQMSQAPLAEALTRLAYAMPTGS
GEPCPAGVNLQWAMLEGPQRIAARVFERGEGPTASSGTSASAVACAAWRIGWVKAGEVSV
VMPGGTAPLRLEEQGGQLLRVSLFGTASLIP
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgacctctttctacgatgcgcgcggtaatcgctacgctgtggtggcgcccgcgcggctg
cacgagctgggcatcgccctgccggccagcgcggccgcggcggcgcaaacccgctcccgc
tggagtacgcaggcgatccaggccgtgtgcgactgggcgcctggcacccggccggaaggg
gccaaggcccatcgcagcgacggcttgctggtcgggccgttccaggacacggcgccgttc
gacctgctgatcgtcaacaccgacggcaccctggccgaacgcagtggcaacggcctgacc
atcttttcccaggccctggccgagcaagggctgctgcaggcccaggggcccactgtgttg
cgggtgcaccatgacacggcggagggcgtgtcgccggtggcgaccgtggtcgaaccggcg
caggtggccggggtggccggtttctggctggacctcgggcaaccgtcgttcggtgcccag
gcggtgggcgcccggcaagggatcgagcgcgatgcttcgagctgcctcgacctgagccgt
gtgtccgggctggcgcggttgcgcccggaatggagccgcagccagttcgtgcggatcggc
aacccgcattgcgtgaccctggtcgatgacgccagcgccttgccgagcaaccgacagatg
agccaggcgcccctggccgaggccctgacgcgccttgcctacgccatgcccaccggcagc
ggcgagccttgcccggcgggggtgaacctgcaatgggcgatgctggagggcccgcagcgc
attgccgcccgggtgttcgaacgcggcgaggggcccaccgcgtcctccggcaccagcgcc
agcgcggtggcctgcgcggcgtggcggattggctgggtcaaggccggtgaagtctcggtc
gtgatgcccggcggcaccgcgccgctgcgcctggaagagcagggcgggcaattgctgcgg
gtgagcctgttcggtacggcaagcctgatcccctag
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