KEGG   Pseudomonas chlororaphis PCL1606: PCL1606_24480
Entry
PCL1606_24480     CDS       T03768                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pcz  Pseudomonas chlororaphis PCL1606
Pathway
pcz02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pcz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PCL1606_24480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcz03021]
    PCL1606_24480
Transcription machinery [BR:pcz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PCL1606_24480
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Sigma70_ECF PhyR_sigma-like
Other DBs
NCBI-ProteinID: AKA23901
LinkDB
Position
2603466..2603978
AA seq 170 aa
MGENRNPHYPLVGQMFKRDYSWLCAAVGRALGCHHSAQDIASETFLRVLALPDPTSIREP
RALLTTIARRLVYEGWRRQDLERAYLESLALAPTPVHPSPEERALVIEALLAVDRLLNGL
SAKARTAFLYHQLDGLTYAEIGQRLGGSTSRVQQYMAEAFKRCYLAMAEA
NT seq 513 nt   +upstreamnt  +downstreamnt
atgggtgagaatcggaaccctcattacccgctggtcgggcagatgttcaaacgcgactat
tcatggctgtgcgccgcggtggggcgtgccctgggctgtcaccacagtgcgcaggacatc
gcctcggaaaccttcctgcgggtgctggcactgccggacccgacctcgatccgcgaaccg
cgggcgctgctgaccaccatcgcccggcgcctggtctacgaaggctggcggcgccaggac
ctggagcgcgcctacctcgaaagcctggccctggcgccgacgcccgtgcatccctcgccc
gaggagcgggcgctggtgatcgaggcgctgctggccgtggaccgcttgctcaacggcctg
tcggccaaggccaggacggcctttctctaccaccagctcgacggcctgacctacgccgaa
atcggccagcgactggggggctccaccagccgcgtccagcagtacatggccgaggcgttc
aagcgctgttacctggcgatggccgaggcatga

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