Pseudomonas chlororaphis PCL1606: PCL1606_26520
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Entry
PCL1606_26520 CDS
T03768
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pcz
Pseudomonas chlororaphis PCL1606
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcz03032
]
PCL1606_26520
03400 DNA repair and recombination proteins [BR:
pcz03400
]
PCL1606_26520
Enzymes [BR:
pcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PCL1606_26520
DNA replication proteins [BR:
pcz03032
]
Prokaryotic type
DNA Topoisomerases
PCL1606_26520
DNA repair and recombination proteins [BR:
pcz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PCL1606_26520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AKA24103
UniProt:
A0A0D5XYD3
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All DBs
Position
complement(2857504..2858538)
Genome browser
AA seq
344 aa
AA seq
DB search
MPDSPLRPDLELPPELHYVDDSQPGISRRKRRGTFVYFDPQGQRIADREQIQRINALAVP
PAYTDVWICADPQGHLQATGRDARGRKQYRYHPRWREVRDADKYSRLLQFGTALPSLRRR
LEALLAAPGFSRDKVMATVISLLDATLIRVGNSQYARDNRSYGLTTLRNRHVAIKGSSIL
FQFRGKSGIEHQITVKDPRLARILKRCLELPGQNLFQYLDENGERHSVSSSDVNAYLREL
TGADFTAKDYRTWAGSALALAVLRELHWEPEAEAKRQVVEMVKAVSRQLGNTPAVCRKCY
IHPAVLEGFVQGRLATLPKPRKRKHLKAEEVGLRVFLEHLEQHT
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacagcccattgcgcccagacctcgagctgccaccggagttgcactatgtcgac
gatagccagcccgggatcagccgccggaaacgccgcggcactttcgtctacttcgacccg
cagggccagcgcatcgccgaccgcgagcagatccagcgcatcaacgccctggccgtgcct
ccggcctataccgacgtgtggatctgcgccgacccgcaaggccacctgcaagccaccggc
cgcgacgcccgcgggcgcaagcaataccgctatcacccacgctggcgcgaagtgcgcgac
gccgacaagtattcacgcctgctgcaattcggcaccgccctgccgtccttgcgccggcgc
ctggaagccctgctcgcggcccccggcttcagccgcgacaaagtcatggccacggtcatc
agcctgctcgacgccacgctgattcgcgtcggcaacagccagtacgcccgcgacaaccgc
tcctatggtctgaccaccctgcgcaaccggcacgtggcgatcaaaggcagctcgatcctg
ttccagttccgcggcaagagcggcatcgaacaccagatcaccgtcaaggacccgcgcctg
gcgcgcatcctcaagcgctgcctggaactgcccgggcagaacctgttccagtacctcgac
gaaaacggcgagcgccacagcgtcagttcctccgacgtcaacgcctacctgcgcgagctg
accggcgccgacttcaccgccaaggactaccgcacctgggccggcagcgcgctggccctg
gcggtgctacgcgagctgcactgggagcccgaggccgaggcgaaaagacaggtggtggaa
atggtcaaggcggtctctcggcaactgggcaatacccccgccgtgtgccgcaagtgctat
atccacccggcggtgctcgaaggcttcgtacagggccgcctggcgacgctgcccaagcca
cgcaaacgcaagcacctgaaggccgaggaagtcggcctgagggtgtttctcgaacacctg
gagcaacacacctga
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