Pseudomonas chlororaphis PCL1606: PCL1606_30180
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Entry
PCL1606_30180 CDS
T03768
Name
(GenBank) putative ABC transporter exported protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pcz
Pseudomonas chlororaphis PCL1606
Pathway
pcz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PCL1606_30180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcz02000
]
PCL1606_30180
Transporters [BR:
pcz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PCL1606_30180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AKA24469
UniProt:
A0A0D5Y0G9
LinkDB
All DBs
Position
complement(3288315..3289952)
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AA seq
545 aa
AA seq
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MPSHPYRHPPRLGSRRLAWPGPSFKAWALGLLAGVALLAGTAQAAPRDGGVLNLIAQPEP
PSLMHGVVTHVSTQYVSGKILQGLLTFDRQLKPQPVLARAWTVSADGLTYTFDLQQGVRW
HDGQPFSAEDVLFSFKTFYPEVDKRMASIFSQYVASIEAASPQQVVFHLHKPFAPLLSLL
GSGLRPIVPQHLYAGSDFRNNPYNLKPVGTGPFVFQEWKRGSYIKLAKNPQYWKPGLPHL
DGIVFHVIPDGSSRAAAFERDDVQVLRSGDADYADLKRLAALPGVQASEQGWELYSGLAF
LQINTRKPPLNDPKVRQAILYALNRPFIVDTIFFGSGRVAQGPFVSSSPYHDPQLPQYAY
DPDKAKALIAESGVDVGAVRIRLLNGEKGGAWERLAEYTKQALQPLGFKVQVVTSDAATW
FQRVSDWDFDLTYNFIFQIGDPYLTNAYLYRSDYILKTSPFANVSGYVNPAADTLWNRVA
DTAEGAGRQQLYSQLENLLNNDLPILPIFEMRYPTLYHSQVRNLLQTATSLNEDYESVYL
DAPAP
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtcacccttatcgacatccgccacgcctcgggtcacggcgccttgcctggccc
gggccatcgttcaaggcctgggccctgggcctgctggccggcgtggcgctgctcgccggc
accgcccaggccgccccccgggacggcggcgtgctcaacctgatcgcccagcccgagccg
ccatcgctgatgcacggcgtggtcacccatgtgtcgacccagtacgtcagcggcaagatc
ctccagggcctgctgaccttcgaccggcaactcaagccgcaaccggtgctggcccgggcc
tggacggtgtccgccgatggcctgacctacaccttcgatttgcagcagggcgtgcgctgg
cacgacggccagccgttcagcgccgaggacgtgctgttcagcttcaagaccttctacccg
gaggtcgacaaacgcatggccagcatcttcagccagtacgtggcgtcgatcgaggccgcc
agcccgcagcaggtggtcttccacctgcacaagccgttcgcgcccttgctctcgctgctg
ggcagcggcctgcggccgatcgtgccgcagcacctgtacgccggcagcgactttcgcaac
aacccgtacaacctcaagccggtgggcaccgggccgttcgtgttccaggagtggaagcgc
gggtcctacatcaagctggcgaagaacccgcagtactggaaaccgggcctgccgcacctg
gacggcatcgtcttccacgtgatccccgacggttcctcgcgggccgcggccttcgagcgc
gacgacgtgcaggtgctgcgcagcggcgacgccgactacgccgacctcaagcgcctggcc
gcgctgcccggggtgcaagcctcggagcagggctgggagctgtattcgggcctggcgttc
ctgcagatcaacacgcgcaagccgccgctcaacgatcccaaggtgcgccaggcgatcctc
tatgcgctgaaccgcccgttcatcgtcgacaccatcttcttcggctcgggccgggtggcc
caggggccctttgtctccagctcgccgtaccacgatccgcagctgccgcaatacgcctat
gacccggacaaggccaaggcgctgatcgccgagtccggggtggacgtcggcgcggtgcgc
atccgcctgctcaacggcgaaaagggcggcgcctgggagcgcctggccgagtacaccaag
caggccctgcaacccttggggttcaaggtccaggtggtcacctccgatgccgccacctgg
ttccagcgggtcagcgactgggacttcgacctgacctacaacttcatcttccagatcggc
gacccctacctgaccaacgcctacctgtaccgttcggactacatcctcaagacctcgccc
ttcgccaacgtcagcggctacgtcaacccggcggcggacaccctgtggaaccgggtcgcc
gacaccgccgaaggcgccgggcgccagcagctctacagccagctggagaacctgctgaac
aacgacctgccgatcctgccgatcttcgagatgcgctacccgacgctgtaccacagccag
gtcaggaacctgctgcagaccgccaccagcctcaacgaagactacgaaagcgtctacctc
gacgcccccgcgccatga
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