Pseudomonas chlororaphis PCL1606: PCL1606_34700
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Entry
PCL1606_34700 CDS
T03768
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pcz
Pseudomonas chlororaphis PCL1606
Pathway
pcz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PCL1606_34700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcz02000
]
PCL1606_34700
Transporters [BR:
pcz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PCL1606_34700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
DUF4141
Motif
Other DBs
NCBI-ProteinID:
AKA24921
UniProt:
A0A0D5Y0T7
LinkDB
All DBs
Position
complement(3809545..3810594)
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AA seq
349 aa
AA seq
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MKSKMLKHAACALSLSLLTSLGSARAAPDMVVVGYGGAGQKAQDVAFFQPFSASDGSRLI
QSEYNGEMARIKVMVDTGSVDWDLVQIEGPDLMRGCDEGLYERLDWQALGGSAQLIADAA
QACGSAALVWSVAIAYDTDKLAPGPASWADFWDVKRFPGKRGLRKRAVYNLEFALLADGV
PVDQVYAQLATPQGVERAFAKLDQLKPYIQWWEAGAQPAQWLAAGDVTMTSTYSGRVAQA
AQAGSHLALVWPGSLYGMDYWAIIKGSRHAGQAKRFMAFANRPEAQVKYVEQIPYGPTNT
EAAARLDPRLAQWVPTAPQNLAGALAMDVAFWVDHGEELEERFNAWASR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaaatgctcaagcacgctgcctgcgccttgtcgctgtccctgctgaccagt
ctcggcagcgcccgggcggcgccggacatggtggtggtcggttacggcggcgccgggcag
aaggcccaggacgtggcgttcttccagcctttcagcgccagcgatggcagtcggttgatc
cagagcgagtacaacggcgagatggcgcggatcaaggtcatggtcgacaccggcagcgtc
gactgggacctggtgcagatcgaaggcccggacctgatgcgcggctgcgacgaaggcctg
tacgagcgcctggactggcaggcgctgggtggcagcgcgcaactgatcgccgatgccgcg
caagcgtgcggctcggccgccctggtgtggagcgtggccattgcctacgacaccgacaag
ctggccccggggccggcgtcctgggcggatttctgggacgtgaagcgctttcccggcaag
cgcggcctgcgcaagcgcgcggtgtacaacctggagttcgccttgctggcggacggggtg
ccggtggaccaggtgtacgcccaactcgccacgccccagggggtcgaacgcgccttcgcc
aagctcgatcagctcaagccctatatccagtggtgggaagccggggcgcagccggcccag
tggctggccgccggcgatgtgacgatgacctccacctacagcggccgtgtcgcccaggcg
gcccaggccggcagccacctggcgctggtctggccgggcagcctgtacggcatggattac
tgggcgatcatcaagggctcccggcatgccgggcaggccaagcgcttcatggccttcgcc
aaccggcccgaggcgcaggtcaagtacgtcgagcagattccctacgggccgaccaacacc
gaggccgcggcccggctcgacccgcgcctggcgcaatgggtgcccaccgccccgcagaac
ctggcgggcgcgctggcgatggacgtggcgttctgggtcgaccacggcgaggagctggag
gagcgcttcaacgcctgggccagccgatag
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