Pseudomonas chlororaphis PCL1606: PCL1606_39580
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Entry
PCL1606_39580 CDS
T03768
Name
(GenBank) LacI family transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
pcz
Pseudomonas chlororaphis PCL1606
Pathway
pcz02010
ABC transporters
pcz02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PCL1606_39580
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PCL1606_39580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcz02000
]
PCL1606_39580
Transporters [BR:
pcz02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
PCL1606_39580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
PucR
TraO
Motif
Other DBs
NCBI-ProteinID:
AKA25407
UniProt:
A0A0D5Y340
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All DBs
Position
complement(4340520..4341476)
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AA seq
318 aa
AA seq
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MKLPFAGRLLAVAVLAAASATLPLSSAFAETPEKPKVALVMKSLANEFFLTMEDGAKAYQ
KDHAADFDLVSNGIKDETDTANQIRIVEQMIVSKVNALVIAPADSKAMVPVIKKAVDAGI
TVINIDNQLDPAVLKSKNISVPFVGPDNRKGARLVGEYLAKQLQAGDEVGIIEGVSTTTN
AQQRTAGFKDAMEAAQIKVVSLQSGDWEIDAGNRVAAAMLSEYPNLKALLAGNDSMAVGA
VSAVRAAGKAGKVKVVGYDNINAIKPMLKDGRVLATADQYAAKQAVFGIETALKILKGEK
VDGGANGVIETPVELVTQ
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccattcgctggacgtcttcttgctgtcgctgttctggctgccgcatccgct
acgcttcccctctcttcggcattcgccgagacccccgaaaaacccaaggtcgccctggtc
atgaaatccctggccaacgaattcttcctcaccatggaagacggcgccaaggcttatcag
aaggaccatgccgccgatttcgacctggtctccaacggcatcaaggacgaaaccgacacc
gccaaccagatccggatcgtcgagcagatgatcgtgtcgaaggtcaatgcgctggtgatc
gccccggcggactccaaggccatggtgccggtgatcaagaaggcggtggacgcgggtatc
acggtgatcaacatcgataaccagctggaccctgcggtactcaagagcaaaaacatcagc
gtcccttttgtcggtcccgacaatcgcaagggcgcgcggctggtgggcgagtacctggcc
aagcaactgcaggccggggatgaggtcggcatcatcgagggtgtgtccaccaccaccaac
gcccagcaacggaccgcgggtttcaaggatgcaatggaggctgcgcagatcaaggtggtc
tcgctgcaatccggcgattgggaaatcgacgcgggcaaccgtgtcgccgcagccatgctc
agcgaatacccgaacctcaaggcgctgctggcgggtaacgacagcatggccgtcggcgcc
gtgtcggcggtgcgtgcggcgggcaaggccggcaaggtcaaggtcgttggctacgacaac
atcaatgccatcaagccgatgctcaaggacggtcgagtgctggccacggccgaccagtac
gccgccaagcaggcggtgttcggtatcgagacggcgctgaagattctcaagggcgaaaaa
gtggacggcggcgccaacggcgtgatcgaaactccggtcgagctggtcacccagtaa
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