Pseudomonas chlororaphis PCL1606: PCL1606_42820
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Entry
PCL1606_42820 CDS
T03768
Name
(GenBank) GntR family transcriptional regulator
KO
K03710
GntR family transcriptional regulator
Organism
pcz
Pseudomonas chlororaphis PCL1606
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcz03000
]
PCL1606_42820
Transcription factors [BR:
pcz03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PCL1606_42820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
UTRA
HTH_11
HTH_Crp_2
Rrf2
HTH_41
HTH_46
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AKA25729
UniProt:
A0A0D5Y439
LinkDB
All DBs
Position
complement(4682332..4683045)
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AA seq
237 aa
AA seq
DB search
MIKHVRFDKKKRVVDELIRRIESGLMEDGFLLPGEHQLAQEFSVSRGTLREALAELKRRN
YIATQSGVGSIVTYDGVVLDQQSGWAQALADTGALINTEVLRLEAVQRPDLLSRFGTDQF
IALDRRRRSTDGTVVSLERSLMPATGGLESLPRVGLIDDSLTITLAAYGYIGERGDQWIG
AEPLDEEQAQLLGRPVGSVFLKALRTTYDRRGRFMEQVESFLDPLHFRLHLQFGAQK
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacatgttcgattcgacaagaaaaaacgcgtggtcgatgagttgatccggcgc
atcgaaagcggcctcatggaggacggtttcctgctgccgggcgagcatcagctggcccag
gaattctcggtgagtcgtggcaccttgcgcgaggccctggccgaactcaaacgccgcaac
tacatcgccacccagagcggggtcggctccatcgtcacctacgacggcgtggtgctggat
cagcagagcggctgggcccaggccctggccgataccggcgcgctgatcaataccgaggtg
ctgcgcctggaagcggtgcagcgccccgacctgctcagccgtttcggcaccgaccagttc
attgccctggaccgacgccggcgatccaccgacggcaccgtggtttcccttgaacgttcc
ctgatgcccgccaccggaggcctggaaagcctgccgcgggtggggctgatcgatgattcc
ctgaccattaccctggccgcctacggctatatcggcgagcgcggcgaccaatggatcggc
gccgagccactggacgaagaacaggcacagttgctggggcgcccggtcggcagcgtgttc
ctcaaggccctgcggaccacctatgaccgtcgcggacgcttcatggagcaggtggaaagt
ttcctcgatccgctgcacttccgcctgcacctgcagttcggagcgcagaaatga
DBGET
integrated database retrieval system
