Pseudomonas chlororaphis PCL1606: PCL1606_45430
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Entry
PCL1606_45430 CDS
T03768
Name
(GenBank) type I secretion target
Organism
pcz
Pseudomonas chlororaphis PCL1606
Pathway
pcz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PCL1606_45430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
HemolysinCabind
VWA_2
VWA_CoxE
Cadherin_5
Motif
Other DBs
NCBI-ProteinID:
AKA25990
UniProt:
A0A0D5Y4L5
LinkDB
All DBs
Position
complement(4959250..4968576)
Genome browser
AA seq
3108 aa
AA seq
DB search
MARLIGVVSKVMGQVVAVAADGSRRALVEGDRLFVGDQLVTGAEGAVAVHLQNGQELTLG
RDSSLALTPQLLAHQAPHVQAPEVVTPSEAQLTDVEQLQKAIVAGADPTQTGEATAAGPA
ATGGTAGALGGGHSFVLLEEVGGRVEPVIGFPTAGFNGIPEFVPERIAAVPPTEEPAVVP
PPPNNPVVLGGLSVEGGELTLNEANLPLGSASNPAALVQSGTFSVSAPDGLSSLNVGGIA
VVSGGVAAGFPQSITTGLGNTLTITGYNASTGVVSYSYTLVGNELHAAADGNNSLSEHFS
VVASDSNGDSASNSLDVTITDDVPRAFNDGNVGTASESQLTLNGNVLNNDVQGADRVSTG
PVTAGTFSGTYGTLVLAADGTYTYTVHPGDPAFLALKGGGNGTETFTYTLTDADGDTSSA
NLVLQVHNNDDPVVIQGLNLEGGEATVYEKNLADGSSPDASALTQSGSFTVTALDGLQSL
TVGGINVVTGGAAAGFPQSITTGLGNTLTITGYDAGTGVVSYSYTLSDNEAHPAGNGNNT
LGESFTVLATDVDGSSTSGSLDFTVVDDVPTAANDSNAGVASESQLTLSGNVLSNDVQGA
DRISSGPVTAGTFSGTYGTLVLAADGTYTYTVHPGDPAFLALKGGGNGTETFTYTLTDAD
GDTSTANLVLQVHNNDDPVVIRGLNVEGAELTVYEKNLSDGSSPDAGALTQSGTFTVTAL
DGVQTLTVGGINVVTGGVAAGFPQSVTTSLGNTLTITAYNASTGVVSYSYTLLDNEAHPT
ANGANSLSEHFSVVVTDVDGSTANASLDVNVIDDLPTAVNDSNGTASESQLTLTGNVLTN
DVQGADRVPTGPVTAGTFTGTYGTLVLAADGSYTYTLNTSDADFKALHGNGNGTETFAYT
ITDADGDPSTANLVLSIHNNDDPVVIQGLNVEGAELTVYEKNLSDGSSPNASALTQSGTF
TVTALDGLQTLTVGGINVVTGGVAAGFPQSATTSLGNTLTITGYNASTGVVSYSYTLLDN
EAHPTANGANSLSEHFSVVATDTDGSTANASLDVNVVDDLPTAVNDSNGTASESQLTLTG
NVLTNDVQGADRVPTGPVTAGTFTGTYGTLVLAADGSYTYTLNTADVDFKALHGNGNGTE
TFAYTITDADGDPSTANLVLSIHNNDDPVILTGLDVNGGELTVYEKNLSDGSSPNASALT
QSGTFTVTALDGLQTLTVGGINVVTGGVAAGFPQSATTSLGNTLTITGYNASTGVVSYSY
TLLDNEAHPTANGANSLSEHFTVVATDTDGSTANASLDVNVIDDLPTAVNDSNGTASESQ
LTLTGNVLTNDIQGADRVPTGPVTAGTFTGTYGTLVLAADGSYTYTLNTADADFKALHGN
GNGIETFAYTITDADGDPSTANLVLSIHNNDDPVILTGLDVNGGELTIYEKNLSDGSSPN
AGALTQSGTFTVTALDGLQTLTVGGINVVTGGVAAGFPQSATTSLGNTLTITGYNASTGV
VSYSYTLLDNENHPTANGANSLSEHFTVVATDTDGSSANASLDVNVVDDLPTAVNDSNGT
ASESQLTLTGNVLTNDIQGADRVPTGPVTAGTFTGTYGTLVLAADGSYTYTLNTSDADFK
ALHGNGNGTETFAYTITDADGDPSTANLVLNIHNNDDPVILTGLDVNGGELTVYEKNLSD
GSSPNASALTQSGTFTVTALDGLQTLTVGGINVVTGGVAAGFPQSATTSLGNTLTITGYN
ASTGVVSYSYTLLDNEAHPTANGANSLSEHFSVVATDTDGSTANASLDVNVVDDLPTAVN
DSNGTASESQLTLTGNVLTNDIQGADRVPTGPVTAGTFTGTYGTLVLAADGSYTYTLNTS
DADFKALHGNGNGTETFAYTITDADGDPSTANLVLSIHNNDDPVILTGLDVNGGELTVYE
KNLSDGSSPNAGALTQSGTFTVTALDGLQTLTVGGISVVTGGVAAGFPQSATTGLGNTLT
ITGYNASTGVVSYSYTLLDNENHPTALGANSIAEHFNVVATDTDGSSATAVLDVNIVDDL
PTAAPDVASGIEGATINVSVLGNDVIGADGATAGGAVVGVRAGGNTASPAIGGLGAVISG
TYGTLTLDAAGNAVYHSNPNSISPPGATDVFTYTIRDGDGDESTTTLTINVTDSGLKAVL
DQDVTVYEKALDLTQDGQDLAPGTVIGSEPGNTGETAAGTLVGSVTGGSGAITYTLVGSA
TGTYGQILLNPDGTYRYTLTSAPKTLPNANDGPNVLSESFTYRATDALGNTTTSTIQVNI
VDDVPKAVASERSVTAVEVDSNLLLVIDVSGSMADPSGVGSLSRLDLAKQAISALLDKYD
ALGDIKVQIVTFSSSATDRTPVWVDIATAKTIIAGLSAGGGTNYDAAVATMQSAFVTSGK
LTGAQNVGYFFSDGKPNTGLEIGPADEAALKSFLDANNIRNYAIGLGGGVSNANLDPVAY
DGISHTDTNAVVVTDLNQLDSVLSGTVQGAPVTGNLLGEGGSFGADGGFIKSIVVDGTTY
TYDPKANGNQGGLTFSGGANHGTFNTVDNSVSIATNNSGTLVINLDTGDFSYTSQKTTAV
VITENIGFTVSDNDGDLASSTLVIKVNPNSPPVAMDDHVITNVLSSTVVVPGELLLANDT
DANGNALNATPTSFNTGWVAKGADFTAASQQTIAFAGTNNNAANQAITLARSSFTANTAA
MTAMLVVSGFLGAVSNGNANDEDRITVNLKQGETLNLDHNLAAGHITMEYSFNGGAFTPI
ADGGTFTAAADGSYQIHLVNVADTPGGSTAAENYQLTMTINYSGASNFTPDYHGTYTAND
DHGGSSTANVSISYQDGHTLTGTAGDDILMAGTGDNILNGGDGNDVLTAGSGNNTLHGGN
GNDLLFGGPGNDLLDGGAGNDTASYAHATAGVTVNLSLLVAQNTVGAGTDTLTGIENLVG
SNFNDTLTGDGNNNVLSGGLGNDVLNGGGGDDVLIGGPGNNTLTGGPGADTFQWLGGNSG
HDVVTDFTPGTDKLDLSQLLQGENGTAASLDDYLHFKVTGSGASLVTTIDVSAMAGAIPN
QSIDLAGGNLASHYGVTPGAGGVIAAGADTATIINGMLNDHSLKVDTV
NT seq
9327 nt
NT seq
+upstream
nt +downstream
nt
atggccaggttaatcggtgtcgtcagtaaagtgatggggcaggtggtggcggtcgcggcg
gatggcagccgacgtgccctggtagaaggcgatcggctgtttgtcggggaccagttggtc
accggcgccgagggcgccgtggccgtgcatctgcagaatggccaggagctgaccctgggc
cgtgacagcagcctggccttgaccccgcaattgctggcgcaccaggcgccccatgtgcag
gcgccggaagtggtgactcccagcgaggcgcaactgaccgatgtcgagcaactgcagaaa
gccatagtcgccggcgccgacccgacgcagaccggcgaagccacggcggccggcccggcg
gccacaggcggcaccgcgggcgccctgggcggcgggcatagctttgtcttgctcgaagaa
gtggggggccgggtcgagccggtcattggctttcctaccgcgggtttcaatggcattccc
gagttcgtgccggagcggatcgccgccgtaccgcccactgaagaacccgctgtcgtgccc
cctccaccgaacaacccggtggtcctgggcggcctgtcggtggagggcggtgagctgacc
ctcaacgaagccaatctgcctctgggctcggcgagcaatccggcggcgctggtacagagc
ggcactttcagtgtctcggcccccgatggcctgtccagcctgaacgtcggcggcattgcc
gtggtcagcggcggggtggccgccggcttcccgcaatcgatcaccaccggcctgggcaat
accctgaccattaccggctataacgcttcgacaggtgtcgtcagctacagctacaccctg
gtcggcaacgagctgcatgccgccgccgatggcaacaacagcctgagcgagcatttcagc
gtggtggccagcgacagcaatggcgattcggcgagcaactcgctggacgtcactatcact
gacgacgtgccccgggcattcaatgacggcaacgtcggcacggcctccgaaagccaactg
accctgaacggcaatgtgctgaacaacgatgtgcagggcgccgaccgcgtgtccaccggg
ccggtgactgccggcaccttttcgggaacctacggcaccctggtgctggccgccgacggc
acttacacctacaccgtgcacccgggcgatccggcattcctggcgctcaagggcggcggc
aacggcaccgagaccttcacctacaccctgaccgatgcggacggtgataccagctctgcc
aacctggtgttgcaggtgcacaacaatgacgatccagtggtgattcagggcctgaacctg
gagggcggtgaagccacggtctacgagaagaacctggcggacggcagcagcccggacgcg
agcgcgctgacccagagcggcagcttcaccgtgacggctttggacggcctgcaaagcctc
acggtgggcggcatcaatgtggtgacgggtggtgcagccgccggcttcccgcaatcgatc
accaccggccttggcaataccctgaccattaccggctacgacgccggtactggggtggtc
agctacagctacaccctgtccgacaatgaagcccatccggccggcaacggcaacaacacc
ctgggtgaaagcttcacggtgctcgccacggatgtcgatggcagcagcaccagcggttcg
ctggacttcaccgtggtcgatgacgtgccgacggcggccaacgacagcaatgccggggtg
gcctccgagagccaactgaccctgagcggcaacgtgctgagcaacgatgtgcagggcgcc
gaccgcatatcctccgggccggtgactgccggcaccttcagtggcacctacggcaccctg
gtgctggccgccgacggtacttatacctacaccgtgcacccgggcgatccggcattcctg
gcgctcaagggcggcggcaacggcaccgagaccttcacctacaccctgaccgatgcggac
ggcgataccagcaccgccaacctggtgttgcaggtgcacaacaatgacgatccggtggtg
attcgaggcctgaatgtcgaaggggccgaactcactgtctatgagaagaacctgtcggac
ggcagcagcccggacgcgggcgcgctgactcagagcggcacctttaccgtgactgcgctg
gatggtgtccagaccctgaccgtgggtggcatcaatgtggtgacgggcggcgtggccgcg
ggcttcccgcagtcagtgaccacctcgctgggcaatacgctgacgatcactgcttataac
gccagcacgggtgtggtcagctacagctacaccttgctcgacaatgaggcccatccaacc
gccaacggcgccaatagcctcagcgagcatttctctgtagtggtaaccgatgttgatggc
agtacggccaacgcctcgctggatgtgaacgtgatcgatgatctgccaaccgccgtcaac
gacagcaacggcaccgcttcggaaagccagctgaccctgaccggcaatgtgctgaccaac
gacgttcaaggcgcggaccgcgtgcccactggcccggtgactgccggcacctttacgggc
acttacggcaccctagtcctggcggcagatggctcctacacctacaccctcaatacctcg
gacgccgacttcaaggccctgcacggcaatggcaacggcactgaaaccttcgcctacacc
atcaccgatgcggacggagaccccagcaccgccaacctggtgctgagtatccataacaac
gacgatccggtggtgattcagggcctcaacgtcgagggtgcggaactcacggtctacgaa
aaaaacctcagcgatggctccagccctaatgcttcagcgctgacccaaagtggcaccttc
accgtcaccgccctggacggcctgcaaaccctgacggtggggggtatcaatgtggtaacg
ggtggtgtagccgcaggcttcccgcaatcggcgactactagtctgggcaataccctgacc
attaccggctataacgcttcgacaggtgtcgtcagctacagctacaccctgttggataac
gaggcccacccaaccgccaatggcgccaacagcctcagcgagcacttcagcgtcgtagcg
accgacaccgatggcagtacggccaacgcttcgctggatgtgaacgtggtggacgacctg
ccaaccgccgtcaacgacagcaacggcaccgcttcggaaagccaactgaccctgaccggc
aatgtgctgaccaacgatgtacaaggcgcggaccgcgtgcccacggggccggtaaccgcc
ggcacctttactggaacctacggcactctggtcctggcggccgacggctcctacacctac
accctcaacaccgcggatgtcgacttcaaggctctgcacggcaatggcaacggtactgaa
acctttgcctacaccatcaccgatgcggacggagatcccagcaccgccaatctggtgctg
agcatccataacaacgatgaccccgtgattctcaccggtctggacgtcaatggcggtgaa
ctgacggtctacgaaaaaaacctcagcgacggctccagccctaatgcctcagcgctgacc
caaagcggcaccttcaccgtcaccgccctggacggcctgcaaaccctgacggtgggcggc
atcaatgtggtaacgggtggtgtagccgcaggcttcccgcaatcggcgactactagtctg
ggcaataccctgaccattaccggctataacgcttcgacaggtgtcgttagctacagctac
accctgctcgacaacgaagcccacccaactgcgaatggcgccaatagcctcagcgaacac
ttcaccgtcgtagcgaccgataccgatggcagtacggccaacgcctcgctggatgtgaac
gtgatcgatgatctgccaaccgccgtcaacgacagcaacggcaccgcttcggaaagccaa
ctgaccctgaccggcaatgtgctgaccaacgacatacaaggcgcggaccgagtccccacg
gggccggtgactgccggcacctttaccggaacctacggcaccctggtcctggcggccgac
ggctcctacacctacaccctcaacaccgcggatgccgacttcaaggccctgcacggcaat
ggcaacggcattgaaaccttcgcctacaccatcaccgacgcggacggtgaccccagcacc
gccaacctggtgctgagcatccacaataacgacgaccccgtgatcctcaccggcctggac
gtcaatggcggcgaactcacgatctacgagaagaatctgtcggatggctccagccccaat
gcaggagcactgacccaaagcggcaccttcaccgtcaccgcgctggacggcctgcaaacc
ctgacggtaggaggcatcaatgtagtaacgggcggtgtagccgccggcttcccgcaatcg
gcgactaccagtctgggcaacaccttgaccatcaccggctacaacgccagcaccggcgtg
gtcagctacagctacaccctgcttgacaatgaaaaccatccaactgccaatggcgccaac
agcctcagcgaacacttcaccgtcgtagcgaccgacaccgatggcagctcagccaacgct
tcgctggatgtgaacgtggtcgatgacctgccaactgcggtcaatgacagcaacggcacc
gcttcggaaagccagctgaccctgaccggcaatgtgctgaccaacgacatacaaggcgcg
gaccgcgtccccactggcccggtgactgccggcacctttaccggaacctacggcaccctg
gtcctggcggcggatggctcctacacctacaccctcaacacctcggacgccgacttcaaa
gccctgcacggcaacggtaatggcacggaaaccttcgcctataccatcaccgatgccgac
ggtgaccccagcaccgccaatctggtgctgaatatccataacaacgacgaccccgtgatc
ctcaccggtctggacgtcaatggcggcgaactgacggtctacgaaaaaaacctcagcgac
ggctccagccctaatgcctcagcactgacccaaagcggcaccttcaccgtcaccgcgctg
gacggcctgcaaaccctgacggtaggaggcatcaatgtagtaacgggcggtgtagccgcc
ggcttcccgcaatcggcgactaccagtctgggcaacaccctgaccatcaccggctataac
gcttcgacaggtgtcgtcagctacagctacaccctgttggataacgaagcccacccaact
gccaatggcgccaacagccttagcgagcacttcagcgtcgtggcaaccgacaccgatggc
agtacggccaacgcttcgctggatgtgaacgtggtggacgacctgccaaccgccgtcaac
gacagcaacggcaccgcttcggaaagccaactgaccctgaccggcaatgtgctgaccaac
gacatacaaggcgcggaccgcgtgcctacgggaccggtaacggccggcacctttaccgga
acctacggcaccctggtcctggcggcggatggttcctacacctacaccctcaatacctcg
gacgccgacttcaaagccctgcacggcaatggcaacggcacggaaaccttcgcctacacc
atcaccgatgccgacggtgatcccagcaccgccaacctggtgctgagtatccataacaac
gacgaccccgtgatcctcaccggcctggacgtcaatggcggcgaactgacggtctacgag
aaaaacttgtcggatggcagcagccccaatgcaggagcactgacccaaagcggcaccttc
accgtcaccgccctggacggcctgcaaaccctgacggtgggcggcatcagtgtggtgacg
ggcggcgtggccgcgggcttcccacagtcagcgaccactggcctgggcaataccctgacc
atcaccggttacaacgccagcaccggcgtggtcagctacagctacaccctgctcgacaat
gaaaaccatccgaccgccctgggcgccaacagcatcgccgagcatttcaacgtggtggcc
accgataccgatggcagcagcgccacggcagtactggatgtgaatatcgtcgacgacctg
ccgaccgccgcgccggacgtggcctcgggaatcgagggcgcgacgatcaacgtcagcgtg
ctgggcaacgacgtgatcggcgccgatggcgcgacggccggcggtgcggtcgtcggcgtg
cgggccggcggcaatacggcgagcccggcgatcggcgggctgggcgcggtgatcagcggc
acctacggcaccctgaccctggatgcggccggcaacgccgtgtaccacagcaacccgaac
agcatcagcccgccgggggccaccgatgtgttcacctacaccatccgcgatggcgatggc
gacgaaagcaccaccaccctgaccatcaatgtcaccgacagcggcctcaaggccgtgctc
gaccaggatgtcacggtctacgagaaagccctcgacctgacccaggacggtcaggacctg
gcgcccggcacggtgatcggcagcgagcccggcaacaccggcgaaaccgccgcgggcacc
ctggtcggttcggtcaccggcggcagcggggcgatcacctataccctggtcggcagtgcc
accggtacttacgggcagatcctgctcaaccccgacggcacctaccgatacactctgact
tcggcgccgaaaaccctgcccaatgccaacgacggccccaacgtactcagtgaaagtttc
acctacagggccaccgacgcgctgggcaacaccaccaccagcaccatccaggtcaatatc
gtcgacgacgtgcccaaggccgtggccagcgaacgttcggtcactgcggtggaggtggac
tccaacctgctgctggtcatcgatgtgtcgggcagcatggccgacccgtccggggtcggc
agcctgtcgcggctggaccttgccaagcaggccatcagtgccttgctggacaagtacgat
gccctgggcgacatcaaggtgcagatcgtcaccttcagcagctcggccacggacaggacg
ccggtctgggtcgatatcgccaccgccaagaccatcatcgccggtctcagcgccggtggc
ggcaccaactacgacgcggccgtggcgaccatgcaaagcgccttcgtcacctcgggcaag
ctgacgggcgcgcagaacgtcggttacttcttctccgacggtaaacccaacaccggcctg
gaaatcggcccggcggacgaggcggcgctgaagtccttcctcgatgccaacaacatccgc
aactacgcgattggcctgggcggtggggtcagcaatgccaacctcgacccggtggcgtat
gacggcatcagccacaccgacaccaatgcggtggtggtgaccgatctgaaccagctcgac
tcggtgctttcgggcactgtccagggcgcgccggtcaccggcaacctgctgggcgagggc
ggctcgttcggcgccgatggcggcttcatcaagtccatcgtggtggacggcaccacctac
acctacgaccccaaagccaatggcaaccagggcgggctgaccttcagcggcggggccaac
cacggcaccttcaacaccgtggacaacagcgtcagcatcgccaccaacaacagcggcacc
ctggtgatcaacctcgataccggcgacttcagctacacctcgcagaaaaccacggccgtg
gtgatcaccgaaaacatcggtttcacggtcagcgacaacgacggcgacctggccagctcg
accctggtgatcaaggtcaatccgaactcgccgcccgtggcgatggatgaccatgtcatc
accaacgtgctgtcgagcaccgtggtggtgcccggcgagctgctgctggccaacgacacc
gatgccaacggtaacgccctgaacgccacgccgacttccttcaataccggctgggtagcc
aagggcgcggacttcacggccgcgagccagcagaccatcgccttcgcggggaccaataac
aacgccgccaaccaggccatcaccctcgcgcggtcgtcgttcacggccaataccgcggcc
atgacggcgatgctggtggtcagcggtttcctgggggcggtcagcaatggcaatgccaac
gacgaagaccgcatcaccgtcaacctgaaacagggcgagactctcaacctggaccacaac
ctggcggcgggccacatcaccatggagtattcgttcaacggcggggccttcaccccgatt
gccgatggcggaaccttcactgcggcggccgatggcagctatcagatccacctggtgaac
gtcgccgatacccccggtggcagcacggcggcggaaaactaccagttgaccatgaccatc
aattattccggtgcgagcaatttcaccccggactaccacggcacctacaccgccaacgac
gatcacggtggcagcagtaccgccaacgtcagcatcagctaccaggatggccacaccctc
accggtaccgccggcgacgacatcctgatggccggcacgggcgacaacattctcaatggt
ggcgatggcaatgacgtgctgaccgccggcagcggcaacaacaccctgcatggcggcaat
ggcaatgacctgctgttcggcggccccggcaacgacctgctcgatggcggggcgggcaac
gacactgccagctatgcccatgccacggccggcgtgaccgtcaacctgagcttgctggtg
gcgcagaataccgtcggcgcaggcaccgataccctgaccggcatcgagaacctggtgggc
tcgaacttcaacgacaccctgaccggcgacggcaacaacaatgtgctcagcggcgggctg
ggcaacgacgtgctcaatggcggcggcggggacgatgtgctgatcggcggcccgggcaac
aacaccctgaccggtggcccgggcgcggacaccttccagtggctgggtggcaacagcggg
cacgatgtggtcactgactttaccccgggcaccgacaagctcgacctgtcccagctgttg
cagggcgagaacggcacggcggcctcgctggatgactacctgcacttcaaggtcaccggt
tccggcgcctcgctggtcacgaccatcgatgtcagtgccatggcgggcgccatcccgaac
cagagcatcgacctggccgggggcaacctggcgagccactacggggtgacaccgggggcc
ggcggggtgatcgcggcgggcgcggataccgcgaccatcatcaacggcatgctcaacgac
cattcgttgaaggtcgacaccgtctga
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integrated database retrieval system