Pseudomonas chlororaphis PCL1606: PCL1606_48930
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Entry
PCL1606_48930 CDS
T03768
Name
(GenBank) RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pcz
Pseudomonas chlororaphis PCL1606
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcz03021
]
PCL1606_48930
Transcription machinery [BR:
pcz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PCL1606_48930
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
KinB_sensor
Motif
Other DBs
NCBI-ProteinID:
AKA26340
UniProt:
A0A0D5Y5M4
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All DBs
Position
complement(5318883..5319887)
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AA seq
334 aa
AA seq
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MALSKEVPEFDIDDEVLLMETGIATDSMSNEGSAVPSVRAKSKHSASLKQHKYIDYTRAL
DATQLYLNEIGFSPLLSPEEEVHFARLSQSGDPAGRKRMIESNLRLVVKIARRYVNRGLS
LLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKEL
NVYLRAARELTQKLDHEPSPEEIANLLEKPVGEVKRMLGLNERVSSVDVSLGPDSDKTLL
DTLTDDRPTDPCELLQDDDLSQSIDQWLSELTDKQREVVVRRFGLRGHESSTLEDVGLEI
GLTRERVRQIQVEGLKRLREILEKNGLSSESLFQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggctctcagtaaagaagtgccggagtttgacatcgacgatgaagttctcctgatggag
acgggcatcgccactgattcgatgtcgaatgagggatctgctgtaccttcagttcgtgcc
aaatccaaacactccgcttcactgaaacaacacaaatacattgattacacgcgagcgctc
gatgcaacgcagctgtatctcaatgaaatcggcttttcaccgttgctctccccggaagaa
gaagttcattttgcgcgcctgtcgcaaagtggtgatcctgccgggcgcaagcgaatgatt
gaaagcaacctgcgcctggtggtgaaaatcgcccgacgttatgtcaatcgcgggctttcg
ctgctggacctgatcgaagagggcaacctcggcctgatccgggcggtggaaaagttcgac
ccggagcgcggtttccgcttctcgacctatgccacctggtggatacgtcaaaccatcgaa
cgggcaatcatgaaccagacccggactatccggctgccgattcatgtggtcaaagagctc
aacgtctacctgcgggcagcacgggagctgacacagaaactcgaccatgaaccttcccct
gaagaaatcgccaacctgctggaaaaaccggtgggcgaggtcaagcgcatgctgggcttg
aacgagcgggtttcttcagtcgacgtctcgctgggtccggattcggataaaaccctgctg
gacaccctcaccgacgatcgtcctaccgatccgtgcgaactgctgcaggatgacgacctg
tcgcaaagcatcgaccaatggctttccgaactgaccgacaagcaacgggaagtggtggtt
cgtcgcttcggcttgcgcggccatgaaagcagcaccctggaagatgtggggctggagatc
gggcttacccgggagcgggtacgtcagatccaggtcgaaggtctcaagcgtctgcgcgag
atcctcgaaaagaatggcttgtccagcgagtcgctgttccagtaa
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