Pseudomonas chlororaphis PCL1606: PCL1606_48970
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Entry
PCL1606_48970 CDS
T03768
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pcz
Pseudomonas chlororaphis PCL1606
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcz03016
]
PCL1606_48970
Enzymes [BR:
pcz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PCL1606_48970
Transfer RNA biogenesis [BR:
pcz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PCL1606_48970
Prokaryotic type
PCL1606_48970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AKA26344
UniProt:
A0A0D5Y5P5
LinkDB
All DBs
Position
complement(5322436..5323494)
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AA seq
352 aa
AA seq
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MNELQLLGPRAYGEALGSAVLKATAEDFQVDEVLDIPLTGEGEHLWLWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDMSAAENDTLKILKQARHKR
KLQRGAHAANGFTLRLTALKADKAGIEERLQLIARHGIPNYFGAQRFGHDGGNLVDARDW
AARKALPEQRNLRSRLLSTARSYLFNRVLAARVADGSWQRAQVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPQWGEGDSPAAGATHQLEQRVAGDEADLRDWLIKAGMSHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgcaactactgggcccgcgggcctatggcgaagccctcggcagcgcggtc
ctgaaggccactgccgaagacttccaggtcgacgaagtcctggatattccactgactggc
gaaggcgaacacctgtggctttgggtggaaaagcgcggcctgaacaccgaagaggcggcg
cggcgaattgccaaggcggcgggtgtgccgctgcgtaccgtcagttatgccggcctgaaa
gatcgccaggcattgacccggcagtggttcagcgtgcaactgcccggcaaggccgatccc
gatatgtcggccgctgaaaacgatacgctgaagatcctcaagcaggctcgtcacaagcgc
aagctgcaacgcggcgcgcatgcggccaacggcttcaccctgcggctcacggcgctcaag
gccgacaaggcagggattgaagagcgtctgcaattgatcgcccggcacggtatccccaat
tatttcggcgcccagcgctttgggcatgacggcggcaatctggtcgatgcccgcgactgg
gcggcccgcaaagccttgccggaacagcgcaacctgcgttcgcgcctgctctccaccgcg
cgcagctacttgttcaaccgagtgttggcggcacgggtggccgacggcagttggcagcgc
gcccaggtcggcgacctgctggccttcaccgacagccgcagtttcttcccggccggtgag
gccgaatgcagcgatccgcgcctggcgatcctggacctgcaccccaccgggccgcagtgg
ggagagggcgactcgcccgccgccggggctacgcaccagttggagcagcgggtggctggc
gacgaagcggatctgcgcgactggttgattaaagctggaatgagccacgaacgtcgcatc
ctgcggctgcccattggcgggttgacgtggcattatcccgagcctgacattctgcaactg
gaattcgtcctgccggccggatgcttcgccaccgtattggtgcgtgaactcgtcgatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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