Pseudomonas chlororaphis PCL1606: PCL1606_50280
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Entry
PCL1606_50280 CDS
T03768
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pcz
Pseudomonas chlororaphis PCL1606
Pathway
pcz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PCL1606_50280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcz03400
]
PCL1606_50280
DNA repair and recombination proteins [BR:
pcz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PCL1606_50280
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PCL1606_50280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AKA26475
LinkDB
All DBs
Position
complement(5465752..5466441)
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AA seq
229 aa
AA seq
DB search
MSSQAPIGQPAYVLHSRAYRESSALVDFLTPQGRLRAVLRGARGKAGTLARPFVPLEVEF
RGRGELKNVGRMESAGTATWLNGEALFSGLYLNELLIRLLPAEDPHPAIFEHYAATLLAL
AEGRALEPLLRAFEWRLLDDLGYGFALDSDIHGAPVLAEGLYRLQVDAGLEQVHLLQPGL
FNGTELLAMAQADWSAPGALAAAKRLMRQALAVHLGGRPLVSRELFRKP
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtcaagcgcccatcggccagcccgcttatgtcctgcacagccgcgcctatcgc
gagagcagcgcgttggtggatttcctcaccccgcaaggacggctgcgcgcggtattgcgc
ggcgcgcggggcaaggccgggaccctggcgcgacccttcgtgccgctggaggtcgagttc
cgcgggcgcggcgagctgaaaaacgtcggccgcatggagagtgccggcacggccacctgg
ctcaacggcgaggcgctgttcagcggtctctacctcaatgaattgctgatccgcctgctg
cccgccgaagacccgcacccggcgatcttcgagcactatgcggcaaccctgctggccctg
gccgaggggcgtgccctcgagccgttgctacgggctttcgagtggcgcctgctggacgac
ctgggctacggcttcgccctggacagcgatatccatggcgcgccagtcctcgccgagggc
ctgtatcgcctgcaagtggatgccggcctggagcaggttcacctgttgcaacccggcctg
ttcaacggcaccgagttgctggccatggcccaggccgactggagcgcccccggcgcgctg
gcggcggccaagcgcctgatgcgccaggcgttggcggtgcacctgggcggtcggccactg
gtcagccgcgagctgttccgcaagccctga
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