Pseudomonas chlororaphis PCL1606: PCL1606_52710
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Entry
PCL1606_52710 CDS
T03768
Name
(GenBank) peptidase M54
KO
K02600
transcription termination/antitermination protein NusA
Organism
pcz
Pseudomonas chlororaphis PCL1606
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcz03021
]
PCL1606_52710
03009 Ribosome biogenesis [BR:
pcz03009
]
PCL1606_52710
Transcription machinery [BR:
pcz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PCL1606_52710
Ribosome biogenesis [BR:
pcz03009
]
Prokaryotic type
rRNA transcription factors
PCL1606_52710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
RNA_pol_A_CTD
DUF507
DUF2187
Motif
Other DBs
NCBI-ProteinID:
AKA26716
UniProt:
A0A0D5Y609
LinkDB
All DBs
Position
complement(5719225..5720706)
Genome browser
AA seq
493 aa
AA seq
DB search
MSKEVLLVVESVSNEKGVPASVIFEALELALATATKKRFEDEVDLRVEINRHTGAYETFR
RWTVVEEADLDDPAVETWPSKVQETHPGAKVGDVVEEKIESIEFGRIAAQTAKQVIVQKV
REAERAQVVDAYRERLGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIISRETFRVGVR
LRALLKEIRTENRGPQLILSRTAPEMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIV
DEDAHAMDIAVGADNLAQAIGRGGQNVRLASQLTGWTLNVMTESDIQAKQQAETGDILRN
FIEELEVDEELAQVLVDEGFTSLEEIAYVPLEEMLNIDGFDEDIVNELRARAKDRLLTKA
IATEEKLADAHPAEDLLSLEGMDKDLAMELAVRGVITREDLAEQSIDDLLDIDGIDDDRA
GKLIMAARAHWFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaagtactgctggttgttgagtcggtatccaatgaaaagggtgtaccggca
agcgtgatttttgaagcgctggagctggccctggccactgctaccaaaaagcgttttgag
gacgaagttgatctgcgtgtggaaatcaatcgccacaccggtgcttacgagactttccgt
cgctggacggtggtcgaagaggcggatctggacgatccggctgtggaaacctggccgagc
aaggtccaggaaacccatccgggcgcaaaagtcggtgatgtcgtcgaggaaaagatcgag
tcgatcgagttcggccgtatcgctgcccagactgccaaacaggtcatcgtgcagaaggtt
cgcgaagcagagcgcgctcaagtcgtcgatgcctaccgcgagcgcctgggtgagatcatc
tccggcaccgtgaaaaaagtgacacgtgacaacgtgatcgtcgacctgggtaacaacgcc
gaggcgttgctggctcgtgaagacatcatttcccgtgagaccttccgtgttggcgtgcgt
cttcgtgcgctgctcaaggaaatccgcaccgagaaccgcggcccgcagttgatcctgtcg
cgtaccgcgccggaaatgctgatcgagctgttccgtatcgaagtgccggaaatcgccgaa
ggcctgatcgaagtcatggcggcttcccgtgatccgggatcgcgcgccaagatcgcggtc
cgctccaaagacaagcgcattgaccctcagggcgcgtgcatcggtatgcgcggttcgcgc
gtccaggccgtttccggtgagttgggcggtgagcgtgtggacatcgtcctgtgggacgac
aacccggcccagttcgtgatcaatgccatgtcgccggccgaagttgcggccatcatcgtc
gacgaagatgcccatgccatggatatcgccgttggcgcagacaacctggctcaggccatc
ggtcgcggcggccagaacgtgcgtctggccagccagttgactggctggaccctgaacgtg
atgaccgaatcggacatccaggccaagcagcaagctgaaaccggcgacatcctgcgcaat
ttcatcgaagagctggaagtcgatgaagaactggcgcaggtactggttgatgaaggcttc
accagcctggaagagattgcctacgtaccgttggaagaaatgctcaacatcgacggcttt
gacgaagacatcgtcaacgagcttcgcgctcgtgccaaggatcgcttgttgactaaagcc
atcgctactgaggaaaagctggcagacgcccatccggccgaagacctgctctcgcttgag
ggtatggacaaggatttggcgatggaactggcggtgcgcggcgtaattacccgcgaagac
ctggccgagcagtctattgacgacctgctcgacatcgacggcattgacgatgatcgtgcc
ggcaagttgatcatggccgcccgagcccattggttcgagtaa
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