Pseudomonas chlororaphis PCL1606: PCL1606_59970
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Entry
PCL1606_59970 CDS
T03768
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pcz
Pseudomonas chlororaphis PCL1606
Pathway
pcz03030
DNA replication
pcz03410
Base excision repair
pcz03420
Nucleotide excision repair
pcz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCL1606_59970
03410 Base excision repair
PCL1606_59970
03420 Nucleotide excision repair
PCL1606_59970
03440 Homologous recombination
PCL1606_59970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcz03032
]
PCL1606_59970
03400 DNA repair and recombination proteins [BR:
pcz03400
]
PCL1606_59970
Enzymes [BR:
pcz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PCL1606_59970
DNA replication proteins [BR:
pcz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PCL1606_59970
DNA repair and recombination proteins [BR:
pcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PCL1606_59970
NER (nucleotide excision repair)
GGR (global genome repair) factors
PCL1606_59970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AKA27440
UniProt:
A0A0D5Y8R0
LinkDB
All DBs
Position
complement(6545233..6548046)
Genome browser
AA seq
937 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDEMYAEYKANRPSMPDDMRVQIEPLHASVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMSGSSMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLKELYDQLDIVPSLPIRGAKTLPAKLEEHKEM
AFLSYQLATIKVDVPLDIGLDDLHLGEPDRDKLIELYSLMEFKSWLDELQRDAKRLELSE
AATPGAAVDLLTVVEVEVEVAVPAVVETRYETILDQTRFDVWLEKLKNAKLFAFDTETTG
IDAQQAQLVGLSFAVEAHEAAYIPLTHSYIGAPEQLDRDTVLRALKPLLEDPQKLKVGQH
AKFDMNILANCAIGGDQANGITVRGVAFDTMLESYVLNSTATRHDMDSLAEKYLGHATVS
FQDIAGKGAKQLTFDQIALEQAGPYAAEDADVTLRLHQVLHEKLAAIPSLASVLSDIEMP
VVPVLARIERQGALVDADLLGVQSIELGDKMVALEREAFEIAGEEFNLGSPKQLGVILYD
KLGLPVLKKTAKGQPSTAEEVLAKLAEDDYPLPRVLMQYRSMSKLKSTYTDRLPEQINPR
TGRIHTSYHQAVASTGRLSSSDPNLQNIPVRTAEGRRIRQAFIAPPGYKLLAADYSQIEL
RIMAHLSRDEGLMNAFRNNLDVHTATAAEVFKVDLENVSSDQRRSAKAINFGLIYGMGAQ
KLGKDIGVDTKTAKAYIDTYFARYPGVREYMDRTRAQAADQGYVETLFGRRLYLPEINSN
KPQERAGAERTAINAPMQGTAADIIKKAMVAVDNWLATSGLDAKVILQVHDELVLEVRED
LVAQVSEEIRGYMSNAATLDVPLLVEVGVGSNWDEAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcgtcctacctgtatcgcgccttccac
gcgctgccgcccttgaccacttccaaaggcatgccgaccggtgcggtcaagggcgtgctg
aacatgcttaagagtctgcgcaagcagtaccccgacagcccgttcgccgtggtgttcgac
gccaagggcgggactttccgcgacgagatgtatgccgagtacaaggccaatcgcccgagc
atgcccgatgacatgcgcgtccagatcgagccgctgcatgccagcgtgatcgccctgggc
tttccgctgctgtgcgtcgagggcgtcgaggcggacgacgtgatcggcaccctggcccgc
agcagcgcggcggctgaccgtccggtggtgatttccaccggcgacaaggacatggcgcaa
ctggtggacggccacattacgctggtcaacaccatgtccggaagcagcatggacgtggaa
ggcgtgaaggagaaattcggcgtcgctcccgagcagatcatcgattacctggcgctgatg
ggcgattcctccgacaacattccgggggtgccggggattggccccaagaccgcttctggc
ctgctggtcggggtgaacggcggcctgaaagagctgtatgaccagctcgacatcgtgccg
agcctgccgattcgcggggccaagaccctgccggccaagctcgaggaacacaaggaaatg
gcgttcctctcctatcagctggcgaccatcaaggtcgacgtaccgctggacatcggcctg
gatgacctgcacctgggcgagccggaccgggacaagctgatcgagctgtacagcctgatg
gagttcaagagctggctcgacgaactgcagcgcgacgccaagcgcctcgaactgagcgaa
gccgcgacgcctggagcggcggtcgatctgctgaccgtggtcgaggttgaagtcgaggtc
gcggtgccggccgttgtcgaaacccgatatgaaaccatcctcgaccagacgcgtttcgac
gtctggctggagaagctgaagaacgccaagctgttcgccttcgacaccgaaaccaccggc
atcgatgcccagcaggcgcagcttgtgggcttgtctttcgcggtagaggcccacgaagcg
gcctatatcccgctgacccactcctacatcggcgcgcccgaacagctggatcgcgatacg
gtcctgcgcgcgttgaagccgctgctggaggacccgcaaaaactaaaggtcggccagcac
gccaagttcgacatgaacatcctggccaactgcgccatcggtggcgatcaggccaatggc
atcaccgtgcgtggtgtcgctttcgacacgatgctcgaatcctacgtgctcaactccacg
gccacccgccacgacatggacagcctggcggagaaatacctgggccatgccaccgtgagt
ttccaggacatcgccggcaagggcgccaagcagctgacgttcgatcagattgcccttgag
caggccgggccctatgccgccgaagacgccgatgtgaccctgcgcctgcatcaggtgctg
cacgagaagctggcggcgatcccgagcctggccagtgtgctcagcgatatcgaaatgccc
gtggtgccggtgctggcgcgcatcgagcgccagggtgcgctggtggatgccgacctgctg
ggcgtgcagagcatcgagctgggcgacaagatggtggcgctggagcgcgaagccttcgag
attgccggcgaggaattcaacctggggtcgcccaagcaactgggggtgatcctctacgac
aagctcggcctgccggtgctgaagaagaccgccaagggccagccgtccaccgccgaagag
gtgctggccaagctggccgaggacgactacccgctgcccagggtgctgatgcaataccgc
tccatgagcaagctcaagagcacctacaccgaccgcctgccggagcagatcaacccgcgt
accgggcggatccacacctcctaccatcaggcggtggcctccaccgggcgtttgtcctcc
agcgatccgaacctgcagaacatcccggtgcgtaccgccgaaggccggcgcatccgccag
gcgttcatcgctccgccgggctacaagctgctggcggcggactattcgcagattgagttg
cggatcatggcgcacctgtcccgcgacgaaggcttgatgaatgctttccgtaacaacctc
gacgtgcacacggcgacggccgccgaggtgttcaaggtcgacctcgagaacgtcagctcc
gatcagcgccgcagcgcgaaggcgatcaacttcgggctgatctacggcatgggcgcgcag
aagctcggcaaggacatcggcgtcgataccaagaccgccaaggcctatatcgacacctac
ttcgcccgttaccccggcgtgcgcgaatacatggaccgcacgcgtgcccaggccgcggac
cagggctatgtggaaaccctgttcgggcgtcgcctgtacctgccggagatcaactccaac
aagccacaggagcgtgccggcgccgagcgtacggcgatcaacgcgccgatgcagggtacg
gcggccgacatcatcaagaaggcaatggtggcggtggacaattggctggcgacctcgggc
ctggatgccaaagtcatcctgcaagtgcacgacgaactggtgctggaggtgcgcgaagat
ctggtggcccaggtgagcgaggagatccgcggctatatgagcaacgccgcgaccctggat
gtgccgctgctggtcgaagtcggggtgggcagcaactgggacgaggcgcactga
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